Fix an issue with "unasigned issues"

Rename the view to userIssues
The last part of the previous patch.
2011-10-04 10:05:42 +02:00 · 2011-10-03 10:17:10 +02:00 · 2011-10-03 10:00:35 +02:00 · 2011-10-01 22:43:00 +02:00 · 2011-09-12 17:54:40 +02:00 · 2011-08-17 20:17:14 +02:00
228 changed files with 12896 additions and 8372 deletions
--- a/.gitignore
+++ b/.gitignore
@@ -9,3 +9,6 @@ indefero-*.zip
 src/IDF/conf/path.php
 .tx/config
 src/IDF/locale/idf.pot.bak
+test/test.db
+test/tmp
+test/config.php
--- a/3
+++ b/3
@@ -12,12 +12,14 @@ Much appreciated contributors (in alphabetical order):
    Brian Armstrong <brianar>
    Charles Melbye <charlie@yourwiki.net>
    Ciaran Gultnieks <ciaran@ciarang.com>
+    Daniel Steudler <steudlerdaniel@gmail.com>
    David Feeney <davidf>
    Denis Kot <denis.kot@gmail.com>                 - Russian translation
    Dmitry Dulepov <dmitryd>
    Fernando Sayago Gil <mikados.mikados@gmail.com> - Spanish translation
    Jakub Viták <mainiak@gmail.com>                 - Czech translation
    Janez Troha <http://www.dz0ny.info>             - Slovenian translation
+    Jean-Philippe Fleury <jpfleury>
    Jerry <lxb429@gmail.com>                        - Chinese translation
    Julien Issler <julien@issler.net>
    Ludovic Bellière <xrogaan>
@@ -30,6 +32,7 @@ Much appreciated contributors (in alphabetical order):
    Raphaël Emourgeon <raphael>
    Samuel Suther <info@suther.de>                  - German translation
    Sindre R. Myren <sindrero@stud.ntnu.no>
+    Stewart Platt <stew@futurete.ch>
    Thomas Keller <me@thomaskeller.biz>             - Monotone support
    Vladimir Solomatin <slash>
    William Martin <william.martin@lcpc.fr>
--- a/INSTALL.mdtext
+++ b/INSTALL.mdtext
@@ -4,6 +4,12 @@ The installation of InDefero is composed of 2 parts, first the
 installation of the [Pluf framework](http://www.pluf.org) and second,
 the installation of InDefero by itself.

+## PHP modules for indefero
+
+Indefero need the GD module for PHP. It's named "php5-gd" in debian.
+
+    $ apt-get install php5-gd
+
 ## Recommended Layout of the Files

 If your server document root is in `/var/www` a good thing is to keep
@@ -126,6 +132,7 @@ The documentation is available in the `doc` folder.
 * Subversion: `doc/syncsvn.mdtext`.
 * Mercurial: `doc/syncmercurial.mdtext`.
 * Git: `doc/syncgit.mdtext`.
+* Monotone: `doc/syncmonotone.mdtext`

 ## For the Apache Webserver Users

--- a/9
+++ b/9
@@ -37,6 +37,10 @@ help:
 	@printf "\tpo-push    - Send the all PO files to the transifex server.\n"
 	@printf "\tpo-pull    - Get all PO files from the transifex server.\n"
 	@printf "\tpo-stats   - Show translation statistics of all PO files.\n"
+	@printf "\nMisc Rules :\n";
+	@printf "\tdb-install - Install the database schema.\n"
+	@printf "\tdb-update  - Update the database schema.\n"
+

 #
 #   Internationalization rule, POT & PO file manipulation
@@ -139,3 +143,8 @@ po-stats:
 		> indefero-$(@:-zipfile=)-`git log $(@:-zipfile=) -n 1 \
 		--pretty=format:%h`.zip

+db-install:
+	@cd src && php $(PLUF_PATH)/migrate.php --conf=IDF/conf/idf.php -a -d -i
+
+db-update:
+	@cd src && php $(PLUF_PATH)/migrate.php --conf=IDF/conf/idf.php -a -d
--- a/NEWS.mdtext
+++ b/NEWS.mdtext
@@ -1,3 +1,77 @@
+# InDefero 1.2 - xxx xxx xx xx:xx 2011 UTC
+
+ATTENTION: You need Pluf [324ae60b](http://projects.ceondo.com/p/pluf/source/commit/324ae60b)
+or newer to properly run this version of Indefero!
+
+## New Features
+
+- Indefero's issue tracker can now bi-directionally link issues with variable, configurable
+  terms, such as "is related to", "is blocked by" or "is duplicated by" (issue 638)
+- Mercurial source views now show parent revisions (if any) and detailed change information
+- Subversion source views now show detailed change information (issue 622)
+- File download URLs now contain the file name rather than the upload id; old links still work though (issues 559 and 686)
+- Display monotone file and directory attributes in the tree and file view
+  (needs a monotone with an interface version of 13.1 or newer)
+- The context area is now kept in view when a page scrolls down several pages
+
+## Bugfixes
+
+- The SVN interface acts more robust if an underlying repository has been restructured (issues 364 and 721)
+- monotone zip archive entries now all carry the revision date as mtime (issue 645)
+- Timeline only displays filter options for items a user has actually access to (issue 655)
+- The log, tags and branches parsers for Mercurial are more robust now (issue 663)
+- Fix SSH public key parsing issues and improve the check for existing, uploaded keys (issue 679)
+- Diff views now show empty context lines for git and hg again (issue 688)
+- Let the SVN command line client not store the login credentials we give him as arguments
+- The usher section in the forge administration no longer displays a bogus
+  server enty in case no monotone server is configured in the connected
+  usher instance
+- Prevent a timeout from popping up when Usher is restarted (issue 695)
+- The SyncMonotone plugin now cleans up partial artifacts it created during the addition of
+  a new project or monotone key, in case an error popped up in the middle (issue 697)
+- Indefero now sends the MD5 checksum as HTTP header when downloading a file from the
+  download area. Additionally, a unneeded redirect has been removed. (issue 716)
+- Source links without a specific revision did not work due to a wrong regex (issue 730)
+- Better error detection and reporting in the SyncMonotone plugin
+  ATTENTION: This needs Pluf 46b7f251 or newer!
+- Fix the branch links users of the Subversion frontend get when they enter a wrong revision
+  and only display this list if there are any branches available for all SCMs
+- If git's author name is not encoded in an UTF-8 compatible encoding, skip the author lookup,
+  as we have no information what the author string is actually encoded in
+- Indefero no longer displays an empty parents paragraph in the commit view for root revisions of
+  a git repository
+
+## Documentation
+
+- The documentation on the setup of the monotone plugin has been improved.
+
+## Translations
+
+# InDefero 1.1.2 - Thu May 26 07:42:25 2011 UTC
+
+## Bugfixes
+
+- Fix tags extraction from git repository (issue 675)
+- Fix SSH validation method (issue 671)
+- Fix malformed URL in the RSS (issue 666)
+- Fix validateRevision call for Mercurial Scm (issue 657)
+
+## Translations
+
+- Missing word in French translation (issue 672)
+- Update Spanish translation
+
+# InDefero 1.1.1 - Mon Mar 28 15:52 2011 UTC
+
+## Bugfixes
+
+- Fix an incompatibility with Python 3.1 in gitserve.py (issue 554)
+- Fix PHP error when the commit view shows a commit with changed binary files (issue 643)
+- A migration problem prevented the preferences page being displayed properly (issues 644 and 653)
+- Fix PHP error when trying to create Mercurial source archives (issue 648)
+- Improve the French translation (issue 651)
+- Registration page missed a link to password recovery that was mentioned in a form error (issue 652)
+
 # InDefero 1.1 - Sun Mar 20 11:44 2011 UTC

 ## New Features
--- a/doc/syncmonotone.mdtext
+++ b/doc/syncmonotone.mdtext
@@ -25,7 +25,7 @@ If you install monotone from source (<http://monotone.ca/downloads.php>),
 please follow the `INSTALL` document which comes with the software.
 It contains detailed instructions, including all needed dependencies.

-## Choose your indefero setup
+## Choose your indefero (IDF) setup

 The monotone plugin can be used in several different ways:

@@ -112,14 +112,40 @@ The monotone plugin can be used in several different ways:
            ^D
            $ chmod 600 usher.conf

+    **ATTENTION:** Do _not_ configure a default monotone server key in `usher.conf`,
+    otherwise the individual server key that IDF creates for each project is
+    not used and this could cause problems.
+
    Your indefero www user needs later write access to `usher.conf` and
    `projects/`. There are two ways of setting this up:

-    * Make the usher user the web user, for example via Apache's `suexec`
-    * Use acls, like this:
+    * Make the usher user the web user, for example via Apache's `suexec`.
+      This is however a bit clumsy.
+    * Preferred: Use Access Control Lists (ACLs), like this:

+            #
+            # Linux
+            #
            $ setfacl -m u:www:rw usher.conf
            $ setfacl -m d:u:www:rwx projects/
+            $ setfacl -m d:u:usher:rwx projects/
+            #
+            # FreeBSD
+            #
+            $ setfacl -m user:www:rw::allow usher.conf
+            $ setfacl -m user:www:rwxp:fd:allow projects/
+            $ setfacl -m user:usher:rwxp:fd:allow projects/
+            #
+            # Mac OS X
+            #
+            chmod +a '_www allow read,write' usher.conf
+            chmod +a '_www allow read,write,delete,add_file,add_subdirectory,file_inherit,directory_inherit' projects/
+            chmod +a 'usher allow read,write,delete,add_file,add_subdirectory,file_inherit,directory_inherit' projects/
+
+      In each example's last line, `usher` is the user which is executing
+      the usher instance. **It is very important to add this line, otherwise
+      usher won't be able to read and write into the initial file system
+      setup IDF creates!**

 5. Wrap a daemonizer around usher, for example supervise from daemontools
   (<http://cr.yp.to/damontools.html>):
--- a/logo/no_logo.svg
+++ b/logo/no_logo.svg
@@ -0,0 +1,173 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!-- Created with Inkscape (http://www.inkscape.org/) -->
+
+<svg
+   xmlns:dc="http://purl.org/dc/elements/1.1/"
+   xmlns:cc="http://creativecommons.org/ns#"
+   xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+   xmlns:svg="http://www.w3.org/2000/svg"
+   xmlns="http://www.w3.org/2000/svg"
+   xmlns:sodipodi="http://sodipodi.sourceforge.net/DTD/sodipodi-0.dtd"
+   xmlns:inkscape="http://www.inkscape.org/namespaces/inkscape"
+   sodipodi:docname="no_logo.svg"
+   inkscape:version="0.47 r22583"
+   id="svg2985"
+   height="32"
+   width="32"
+   version="1.1"
+   inkscape:export-filename="/Users/tommyd/Entwicklung/indefero/www/media/idf/img/no_logo.png"
+   inkscape:export-xdpi="89.989998"
+   inkscape:export-ydpi="89.989998">
+  <sodipodi:namedview
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+     objecttolerance="10"
+     gridtolerance="10"
+     guidetolerance="10"
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+     inkscape:pageshadow="2"
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+     inkscape:window-maximized="0"
+     inkscape:current-layer="g2847"
+     showguides="true"
+     inkscape:guide-bbox="true">
+    <sodipodi:guide
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+    <sodipodi:guide
+       orientation="0,1"
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--- a/phpunit.xml
+++ b/phpunit.xml
@@ -12,4 +12,16 @@
            <directory>test/IDF/</directory>
        </testsuite>
    </testsuites>
+
+    <filter>
+        <whitelist>
+            <directory suffix=".php">src/IDF</directory>
+            <exclude>
+                <directory suffix=".php">src/IDF/Tests</directory>
+                <directory suffix=".php">src/IDF/conf</directory>
+                <file>src/IDF/version.php</file>
+            </exclude>
+        </whitelist>
+    </filter>
 </phpunit>
+
--- a/14
+++ b/14
@@ -0,0 +1,14 @@
+#!/usr/bin/env php
+<?php
+
+$xmlfile = dirname(__FILE__) .'/test/report.xml';
+passthru('phpunit --coverage-clover='.$xmlfile);
+$xml = simplexml_load_string(file_get_contents($xmlfile));
+unlink($xmlfile);
+printf(
+   '>>> code coverage %s/%s (%s%%)'."\n",
+   $xml->project->metrics['coveredstatements'],
+   $xml->project->metrics['statements'],
+   round(($xml->project->metrics['coveredstatements']/(float)$xml->project->metrics['statements']) * 100.0, 2)
+);
+
--- a/scripts/gitcron.php
+++ b/scripts/gitcron.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/gitpostupdate.php
+++ b/scripts/gitpostupdate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008-2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/gitserve.php
+++ b/scripts/gitserve.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/gitserve.py
+++ b/scripts/gitserve.py
@@ -3,7 +3,7 @@
 #
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -23,14 +23,17 @@

 import os
 import sys
-import commands
-import traceback
+import subprocess
+
+SCRIPTDIR = os.path.abspath(__file__).rsplit(os.path.sep, 1)[0]
+GITSERVEPHP = '%s/gitserve.php' % SCRIPTDIR
+process = subprocess.Popen(['php', GITSERVEPHP, sys.argv[1]],
+                stdout=subprocess.PIPE, stderr=subprocess.PIPE)
+output = str.encode("\n").join(process.communicate()).strip()
+status = process.wait()

-n = len("/gitserve.py")
-GITSERVEPHP = '%s/gitserve.php' % traceback.extract_stack(limit=1)[0][0][0:-n]
-status, output = commands.getstatusoutput('php %s %s' % (GITSERVEPHP, sys.argv[1]))
 if status == 0:
    os.execvp('git', ['git', 'shell', '-c', output.strip()])
 else:
-    sys.stderr.write("%s\n" % output)
+    sys.stderr.write("%s\n" % output.strip())
 sys.exit(1)
--- a/scripts/hgchangegroup.php
+++ b/scripts/hgchangegroup.php
@@ -4,7 +4,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008-2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/mtnpostpush.php
+++ b/scripts/mtnpostpush.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008-2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/queuecron.php
+++ b/scripts/queuecron.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/svnpostcommit.php
+++ b/scripts/svnpostcommit.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008-2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/scripts/svnpostrevpropchange.php
+++ b/scripts/svnpostrevpropchange.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008-2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Commit.php
+++ b/src/IDF/Commit.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Conf.php
+++ b/src/IDF/Conf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Config/DataProxy.php
+++ b/src/IDF/Config/DataProxy.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Diff.php
+++ b/src/IDF/Diff.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -101,7 +101,7 @@ class IDF_Diff
                $files[$current_file]['chunks'][] = array();

                while ($i < $diffsize && ($addlines >= 0 || $dellines >= 0)) {
-                    $linetype = $this->lines[$i] != '' ? $this->lines[$i][0] : ' ';
+                    $linetype = $this->lines[$i] != '' ? $this->lines[$i][0] : false;
                    switch ($linetype) {
                        case ' ':
                            $files[$current_file]['chunks'][$current_chunk][] =
--- a/src/IDF/EmailAddress.php
+++ b/src/IDF/EmailAddress.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/FileUtil.php
+++ b/src/IDF/FileUtil.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Admin/ProjectCreate.php
+++ b/src/IDF/Form/Admin/ProjectCreate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -319,6 +319,7 @@ class IDF_Form_Admin_ProjectCreate extends Pluf_Form
                           'labels_issue_closed' => IDF_Form_IssueTrackingConf::init_closed,
                           'labels_issue_predefined' =>  IDF_Form_IssueTrackingConf::init_predefined,
                           'labels_issue_one_max' => IDF_Form_IssueTrackingConf::init_one_max,
+                           'issue_relations' => IDF_Form_IssueTrackingConf::init_relations,
                           'webhook_url' => '',
                           'downloads_access_rights' => 'all',
                           'review_access_rights' => 'all',
--- a/src/IDF/Form/Admin/ProjectDelete.php
+++ b/src/IDF/Form/Admin/ProjectDelete.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Admin/ProjectUpdate.php
+++ b/src/IDF/Form/Admin/ProjectUpdate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Admin/UserCreate.php
+++ b/src/IDF/Form/Admin/UserCreate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Admin/UserUpdate.php
+++ b/src/IDF/Form/Admin/UserUpdate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Field/EmailList.php
+++ b/src/IDF/Form/Field/EmailList.php
@@ -3,19 +3,19 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
-# Plume Framework is free software; you can redistribute it and/or modify
-# it under the terms of the GNU Lesser General Public License as published by
-# the Free Software Foundation; either version 2.1 of the License, or
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
 # (at your option) any later version.
 #
-# Plume Framework is distributed in the hope that it will be useful,
+# InDefero is distributed in the hope that it will be useful,
 # but WITHOUT ANY WARRANTY; without even the implied warranty of
 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU Lesser General Public License for more details.
+# GNU General Public License for more details.
 #
-# You should have received a copy of the GNU Lesser General Public License
+# You should have received a copy of the GNU General Public License
 # along with this program; if not, write to the Free Software
 # Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
 #
--- a/src/IDF/Form/IssueCreate.php
+++ b/src/IDF/Form/IssueCreate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -36,6 +36,7 @@ class IDF_Form_IssueCreate extends Pluf_Form
    public $user = null;
    public $project = null;
    public $show_full = false;
+    public $relation_types = null;

    public function initFields($extra=array())
    {
@@ -45,9 +46,12 @@ class IDF_Form_IssueCreate extends Pluf_Form
            or $this->user->hasPerm('IDF.project-member', $this->project)) {
            $this->show_full = true;
        }
+        $this->relation_types = $this->project->getRelationsFromConfig();
+
        $contentTemplate = $this->project->getConf()->getVal(
            'labels_issue_template', IDF_Form_IssueTrackingConf::init_template
        );
+
        $this->fields['summary'] = new Pluf_Form_Field_Varchar(
                                      array('required' => true,
                                            'label' => __('Summary'),
@@ -109,6 +113,20 @@ class IDF_Form_IssueCreate extends Pluf_Form
                                                                    ),
                                            ));

+            $this->fields['relation_type0'] = new Pluf_Form_Field_Varchar(
+                          array('required' => false,
+                                'label' => __('This issue'),
+                                'initial' => current($this->relation_types),
+                                'widget_attrs' => array('size' => 15),
+                                ));
+
+            $this->fields['relation_issue0'] = new Pluf_Form_Field_Varchar(
+                          array('required' => false,
+                                'label' => null,
+                                'initial' => '',
+                                'widget_attrs' => array('size' => 10),
+                                ));
+
            /*
             * get predefined tags for issues from current project
             *
@@ -235,6 +253,63 @@ class IDF_Form_IssueCreate extends Pluf_Form
        return $this->cleaned_data['status'];
    }

+    // this method is not called from Pluf_Form directly, but shared for
+    // among all similar fields
+    function clean_relation_type($value)
+    {
+        $relation_type = trim($value);
+        if (empty($relation_type))
+            return '';
+
+        $found = false;
+        foreach ($this->relation_types as $type) {
+            if ($type == $relation_type) {
+                $found = true;
+                break;
+            }
+        }
+        if (!$found) {
+            throw new Pluf_Form_Invalid(__('You provided an invalid relation type.'));
+        }
+        return $relation_type;
+    }
+
+    function clean_relation_type0()
+    {
+        return $this->clean_relation_type($this->cleaned_data['relation_type0']);
+    }
+
+    // this method is not called from Pluf_Form directly, but shared for
+    // among all similar fields
+    function clean_relation_issue($value)
+    {
+        $issues = trim($value);
+        if (empty($issues))
+            return '';
+
+        $issue_ids = preg_split('/\s*,\s*/', $issues, -1, PREG_SPLIT_NO_EMPTY);
+        foreach ($issue_ids as $issue_id) {
+            if (!ctype_digit($issue_id) || (int)$issue_id < 1) {
+                throw new Pluf_Form_Invalid(sprintf(
+                    __('The value "%s" is not a valid issue id.'), $issue_id
+                ));
+            }
+            $issue = new IDF_Issue($issue_id);
+            if ($issue->id != $issue_id || $issue->project != $this->project->id) {
+                throw new Pluf_Form_Invalid(sprintf(
+                    __('The issue "%s" does not exist.'), $issue_id
+                ));
+            }
+        }
+
+        return implode(', ', $issue_ids);
+    }
+
+    function clean_relation_issue0()
+    {
+        return $this->clean_relation_issue($this->cleaned_data['relation_issue0']);
+    }
+
    /**
     * Clean the attachments post failure.
     */
@@ -298,6 +373,30 @@ class IDF_Form_IssueCreate extends Pluf_Form
        foreach ($tags as $tag) {
            $issue->setAssoc($tag);
        }
+        // add relations (if any)
+        if (!empty($this->cleaned_data['relation_type0'])) {
+            $verb = $this->cleaned_data['relation_type0'];
+            $other_verb = $this->relation_types[$verb];
+            $related_issues = preg_split('/\s*,\s*/', $this->cleaned_data['relation_issue0'], -1, PREG_SPLIT_NO_EMPTY);
+
+            foreach ($related_issues as $related_issue_id) {
+                $related_issue = new IDF_Issue($related_issue_id);
+                $rel = new IDF_IssueRelation();
+                $rel->issue = $issue;
+                $rel->verb = $verb;
+                $rel->other_issue = $related_issue;
+                $rel->submitter = $this->user;
+                $rel->create();
+
+                $other_rel = new IDF_IssueRelation();
+                $other_rel->issue = $related_issue;
+                $other_rel->verb = $other_verb;
+                $other_rel->other_issue = $issue;
+                $other_rel->submitter = $this->user;
+                $other_rel->create();
+            }
+        }
+
        // add the first comment
        $comment = new IDF_IssueComment();
        $comment->issue = $issue;
--- a/src/IDF/Form/IssueTrackingConf.php
+++ b/src/IDF/Form/IssueTrackingConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -72,12 +72,29 @@ Performance          = Performance issue
 Usability            = Affects program usability
 Maintainability      = Hinders future changes';
    const init_one_max = 'Type, Priority, Milestone';
+    // ATTENTION: if you change something here, change the values below as well!
+    const init_relations = 'is related to
+blocks, is blocked by
+duplicates, is duplicated by';
+
+    // These are actually all noop's, but we have no other chance to
+    // tell IDF's translation mechanism to mark the strings as translatable
+    // FIXME: IDF should get a internal translation system for strings like
+    // that, that can also be easily expanded by users
+    private function noop()
+    {
+        __('is related to');
+        __('blocks');
+        __('is blocked by');
+        __('duplicates');
+        __('is duplicated by');
+    }

    public function initFields($extra=array())
    {
        $this->fields['labels_issue_template'] = new Pluf_Form_Field_Varchar(
                                      array('required' => false,
-                                            'label' => __('Define an issue template to hint to the reporter to provide certain information'),
+                                            'label' => __('Define an issue template to hint the reporter to provide certain information'),
                                            'initial' => self::init_template,
                                            'widget_attrs' => array('rows' => 7,
                                                                    'cols' => 75),
@@ -118,6 +135,15 @@ Maintainability      = Hinders future changes';
                                            'widget_attrs' => array('size' => 60),
                                            ));

+        $this->fields['issue_relations'] = new Pluf_Form_Field_Varchar(
+                                      array('required' => true,
+                                            'label' => __('Issue relations'),
+                                            'initial' => self::init_relations,
+                                            'help_text' => __('You can define bidirectional relations like "is related to" or "blocks, is blocked by".'),
+                                            'widget_attrs' => array('rows' => 7,
+                                                                    'cols' => 75),
+                                            'widget' => 'Pluf_Form_Widget_TextareaInput',
+                                            ));
    }
 }

--- a/src/IDF/Form/IssueUpdate.php
+++ b/src/IDF/Form/IssueUpdate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -39,6 +39,7 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
            or $this->user->hasPerm('IDF.project-member', $this->project)) {
            $this->show_full = true;
        }
+        $this->relation_types = $this->project->getRelationsFromConfig();
        if ($this->show_full) {
            $this->fields['summary'] = new Pluf_Form_Field_Varchar(
                                      array('required' => true,
@@ -102,6 +103,52 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
                                                       'size' => 15,
                                                                    ),
                                            ));
+
+            $idx = 0;
+            // note: clean_relation_type0 and clean_relation_issue0 already
+            //       exist in the base class
+            $this->fields['relation_type'.$idx] = new Pluf_Form_Field_Varchar(
+                          array('required' => false,
+                                'label' => __('This issue'),
+                                'initial' => current($this->relation_types),
+                                'widget_attrs' => array('size' => 15),
+                                ));
+
+            $this->fields['relation_issue'.$idx] = new Pluf_Form_Field_Varchar(
+                          array('required' => false,
+                                'label' => null,
+                                'initial' => '',
+                                'widget_attrs' => array('size' => 10),
+                                ));
+
+            ++$idx;
+            $relatedIssues = $this->issue->getGroupedRelatedIssues(array(), true);
+            foreach ($relatedIssues as $verb => $ids) {
+                $this->fields['relation_type'.$idx] = new Pluf_Form_Field_Varchar(
+                          array('required' => false,
+                                'label' => __('This issue'),
+                                'initial' => $verb,
+                                'widget_attrs' => array('size' => 15),
+                                ));
+                $m = 'clean_relation_type'.$idx;
+                $this->$m = create_function('$form', '
+                    return $form->clean_relation_type($form->cleaned_data["relation_type'.$idx.'"]);
+                ');
+
+                $this->fields['relation_issue'.$idx] = new Pluf_Form_Field_Varchar(
+                              array('required' => false,
+                                    'label' => null,
+                                    'initial' => implode(', ', $ids),
+                                    'widget_attrs' => array('size' => 10),
+                                    ));
+                $m = 'clean_relation_issue'.$idx;
+                $this->$m = create_function('$form', '
+                    return $form->clean_relation_issue($form->cleaned_data["relation_issue'.$idx.'"]);
+                ');
+
+                ++$idx;
+            }
+
            $tags = $this->issue->get_tags_list();
            for ($i=1;$i<7;$i++) {
                $initial = '';
@@ -155,6 +202,51 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
    public function clean()
    {
        $this->cleaned_data = parent::clean();
+
+        // normalize the user's input by removing dublettes and by combining
+        // ids from identical verbs in different input fields into one array
+        $normRelatedIssues = array();
+        for ($idx = 0; isset($this->cleaned_data['relation_type'.$idx]); ++$idx) {
+            $verb = $this->cleaned_data['relation_type'.$idx];
+            if (empty($verb))
+                continue;
+
+            $ids = preg_split('/\s*,\s*/', $this->cleaned_data['relation_issue'.$idx],
+                              -1, PREG_SPLIT_NO_EMPTY);
+            if (count($ids) == 0)
+                continue;
+
+            if (!array_key_exists($verb, $normRelatedIssues))
+                $normRelatedIssues[$verb] = array();
+            foreach ($ids as $id) {
+                if (!in_array($id, $normRelatedIssues[$verb]))
+                    $normRelatedIssues[$verb][] = $id;
+            }
+        }
+
+        // now look at any added / removed ids
+        $added = $removed = array();
+        $relatedIssues = $this->issue->getGroupedRelatedIssues(array(), true);
+        $added = array_diff_key($normRelatedIssues, $relatedIssues);
+        $removed = array_diff_key($relatedIssues, $normRelatedIssues);
+
+        $keysToLookAt = array_keys(
+            array_intersect_key($relatedIssues, $normRelatedIssues)
+        );
+        foreach ($keysToLookAt as $key) {
+            $a = array_diff($normRelatedIssues[$key], $relatedIssues[$key]);
+            if (count($a) > 0)
+                $added[$key] = $a;
+            $r = array_diff($relatedIssues[$key], $normRelatedIssues[$key]);
+            if (count($r) > 0)
+                $removed[$key] = $r;
+        }
+
+        // cache the added / removed data, so we do not have to
+        // calculate that again
+        $this->cleaned_data['_added_issue_relations'] = $added;
+        $this->cleaned_data['_removed_issue_relations'] = $removed;
+
        // As soon as we know that at least one change was done, we
        // return the cleaned data and do not go further.
        if (strlen(trim($this->cleaned_data['content']))) {
@@ -214,6 +306,11 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
                    return $this->cleaned_data;
                }
            }
+
+            if (count($this->cleaned_data['_added_issue_relations']) != 0 ||
+                count($this->cleaned_data['_removed_issue_relations']) != 0) {
+                return $this->cleaned_data;
+            }
        }
        // no changes!
        throw new Pluf_Form_Invalid(__('No changes were entered.'));
@@ -255,20 +352,22 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
            foreach ($tags as $tag) {
                if (!Pluf_Model_InArray($tag, $oldtags)) {
                    if (!isset($changes['lb'])) $changes['lb'] = array();
+                    if (!isset($changes['lb']['add'])) $changes['lb']['add'] = array();
                    if ($tag->class != 'Other') {
-                        $changes['lb'][] = (string) $tag; //new tag
+                        $changes['lb']['add'][] = (string) $tag; //new tag
                    } else {
-                        $changes['lb'][] = (string) $tag->name;
+                        $changes['lb']['add'][] = (string) $tag->name;
                    }
                }
            }
            foreach ($oldtags as $tag) {
                if (!Pluf_Model_InArray($tag, $tags)) {
                    if (!isset($changes['lb'])) $changes['lb'] = array();
+                    if (!isset($changes['lb']['rem'])) $changes['lb']['rem'] = array();
                    if ($tag->class != 'Other') {
-                        $changes['lb'][] = '-'.(string) $tag; //new tag
+                        $changes['lb']['rem'][] = (string) $tag; //new tag
                    } else {
-                        $changes['lb'][] = '-'.(string) $tag->name;
+                        $changes['lb']['rem'][] = (string) $tag->name;
                    }
                }
            }
@@ -286,6 +385,47 @@ class IDF_Form_IssueUpdate  extends IDF_Form_IssueCreate
                or ((!is_null($owner) and !is_null($this->issue->get_owner())) and $owner->id != $this->issue->get_owner()->id)) {
                $changes['ow'] = (is_null($owner)) ? '---' : $owner->login;
            }
+            // Issue relations - additions
+            foreach ($this->cleaned_data['_added_issue_relations'] as $verb => $ids) {
+                $other_verb = $this->relation_types[$verb];
+                foreach ($ids as $id) {
+                    $related_issue = new IDF_Issue($id);
+                    $rel = new IDF_IssueRelation();
+                    $rel->issue = $this->issue;
+                    $rel->verb = $verb;
+                    $rel->other_issue = $related_issue;
+                    $rel->submitter = $this->user;
+                    $rel->create();
+
+                    $other_rel = new IDF_IssueRelation();
+                    $other_rel->issue = $related_issue;
+                    $other_rel->verb = $other_verb;
+                    $other_rel->other_issue = $this->issue;
+                    $other_rel->submitter = $this->user;
+                    $other_rel->create();
+                }
+                if (!isset($changes['rel'])) $changes['rel'] = array();
+                if (!isset($changes['rel']['add'])) $changes['rel']['add'] = array();
+                $changes['rel']['add'][] = $verb.' '.implode(', ', $ids);
+            }
+            // Issue relations - removals
+            foreach ($this->cleaned_data['_removed_issue_relations'] as $verb => $ids) {
+                foreach ($ids as $id) {
+                    $db = &Pluf::db();
+                    $table = Pluf::factory('IDF_IssueRelation')->getSqlTable();
+                    $sql = new Pluf_SQL('verb=%s AND (
+                                        (issue=%s AND other_issue=%s) OR
+                                        (other_issue=%s AND issue=%s))',
+                                        array($verb,
+                                              $this->issue->id, $id,
+                                              $this->issue->id, $id));
+                    $db->execute('DELETE FROM '.$table.' WHERE '.$sql->gen());
+                }
+
+                if (!isset($changes['rel'])) $changes['rel'] = array();
+                if (!isset($changes['rel']['rem'])) $changes['rel']['rem'] = array();
+                $changes['rel']['rem'][] = $verb.' '.implode(', ', $ids);
+            }
            // Update the issue
            $this->issue->batchAssoc('IDF_Tag', $tagids);
            $this->issue->summary = trim($this->cleaned_data['summary']);
--- a/src/IDF/Form/MembersConf.php
+++ b/src/IDF/Form/MembersConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Password.php
+++ b/src/IDF/Form/Password.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/PasswordInputKey.php
+++ b/src/IDF/Form/PasswordInputKey.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/PasswordReset.php
+++ b/src/IDF/Form/PasswordReset.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/ProjectConf.php
+++ b/src/IDF/Form/ProjectConf.php
@@ -0,0 +1,140 @@
+<?php
+/* -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- */
+/*
+# ***** BEGIN LICENSE BLOCK *****
+# This file is part of InDefero, an open source project management application.
+# Copyright(C) 2008-2011 Céondo Ltd and contributors.
+#
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+#(at your option) any later version.
+#
+# InDefero is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+#
+# ***** END LICENSE BLOCK ***** */
+
+
+/**
+ * Configuration of the project.
+ */
+class IDF_Form_ProjectConf extends Pluf_Form
+{
+    public $project = null;
+
+    public function initFields($extra=array())
+    {
+        $this->project = $extra['project'];
+
+        // Basic part
+        $this->fields['name'] = new Pluf_Form_Field_Varchar(array('required' => true,
+                                                                  'label' => __('Name'),
+                                                                  'initial' => $this->project->name,
+                                                                 ));
+        $this->fields['shortdesc'] = new Pluf_Form_Field_Varchar(array('required' => true,
+                                                                       'label' => __('Short Description'),
+                                                                       'initial' => $this->project->shortdesc,
+                                                                       'widget_attrs' => array('size' => '68'),
+                                                                      ));
+        $this->fields['description'] = new Pluf_Form_Field_Varchar(array('required' => true,
+                                                                         'label' => __('Description'),
+                                                                         'initial' => $this->project->description,
+                                                                         'widget_attrs' => array('cols' => 68,
+                                                                                                 'rows' => 26,
+                                                                                                ),
+                                                                         'widget' => 'Pluf_Form_Widget_TextareaInput',
+                                                                        ));
+
+        // Logo part
+        $upload_path = Pluf::f('upload_path', false);
+        if (false === $upload_path) {
+            throw new Pluf_Exception_SettingError(__('The "upload_path" configuration variable was not set.'));
+        }
+        $upload_path .= '/' . $this->project->shortname;
+        $filename = '/%s';
+        $this->fields['logo'] = new Pluf_Form_Field_File(array('required' => false,
+                                                         'label' => __('Update the logo'),
+                                                         'initial' => '',
+                                                         'help_text' => __('The logo must be a picture with a size of 32 by 32.'),
+                                                         'max_size' => Pluf::f('max_upload_size', 5 * 1024),
+                                                         'move_function_params' =>
+                                                         array('upload_path' => $upload_path,
+                                                               'upload_path_create' => true,
+                                                               'file_name' => $filename,
+                                                               )
+                                                         ));
+
+        $this->fields['logo_remove'] = new Pluf_Form_Field_Boolean(array('required' => false,
+                                                                         'label' => __('Remove the current logo'),
+                                                                         'initial' => false,
+                                                                         'widget' => 'Pluf_Form_Widget_CheckboxInput',
+                                                                         ));
+    }
+
+    /**
+     * If we have uploaded a file, but the form failed remove it.
+     *
+     */
+    function failed()
+    {
+        if (!empty($this->cleaned_data['logo'])
+            && file_exists(Pluf::f('upload_path').'/'.$this->cleaned_data['logo'])) {
+            unlink(Pluf::f('upload_path').'/'.$this->cleaned_data['logo']);
+        }
+    }
+
+    public function clean()
+    {
+        if (!isset($this->cleaned_data['logo_remove'])) {
+            $this->cleaned_data['logo_remove'] = false;
+        }
+
+        return $this->cleaned_data;
+    }
+
+    public function clean_logo()
+    {
+        if (empty($this->cleaned_data['logo'])) {
+            return '';
+        }
+
+        $meta = getimagesize(Pluf::f('upload_path') . '/' . $this->project->shortname . $this->cleaned_data['logo']);
+
+        if ($meta === false) {
+            throw new Pluf_Form_Invalid(__('Could not determine the size of the uploaded picture.'));
+        }
+
+        if ($meta[0] !== 32 || $meta[1] !== 32) {
+            throw new Pluf_Form_Invalid(__('The picture must have a size of 32 by 32.'));
+        }
+
+        return $this->cleaned_data['logo'];
+    }
+
+    public function save($commit=true)
+    {
+        $conf = $this->project->getConf();
+
+        // Basic part
+        $this->project->name = $this->cleaned_data['name'];
+        $this->project->shortdesc = $this->cleaned_data['shortdesc'];
+        $this->project->description = $this->cleaned_data['description'];
+        $this->project->update();
+
+        // Logo part
+        if ($this->cleaned_data['logo'] !== "") {
+            $conf->setVal('logo', $this->cleaned_data['logo']);
+        }
+        if ($this->cleaned_data['logo_remove'] === true) {
+            @unlink(Pluf::f('upload_path') . '/' . $this->project->shortname . $conf->getVal('logo'));
+            $conf->delVal('logo');
+        }
+    }
+}
--- a/src/IDF/Form/Register.php
+++ b/src/IDF/Form/Register.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/RegisterConfirmation.php
+++ b/src/IDF/Form/RegisterConfirmation.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/RegisterInputKey.php
+++ b/src/IDF/Form/RegisterInputKey.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/ReviewCreate.php
+++ b/src/IDF/Form/ReviewCreate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/ReviewFileComment.php
+++ b/src/IDF/Form/ReviewFileComment.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -52,7 +52,7 @@ class IDF_Form_ReviewFileComment extends Pluf_Form
                                            ));
        }
        $this->fields['content'] = new Pluf_Form_Field_Varchar(
-                                      array('required' => true,
+                                      array('required' => false,
                                            'label' => __('General comment'),
                                            'initial' => '',
                                            'widget' => 'Pluf_Form_Widget_TextareaInput',
@@ -96,23 +96,39 @@ class IDF_Form_ReviewFileComment extends Pluf_Form
     */
    public function clean()
    {
-        foreach ($this->files as $filename => $def) {
-            if (!empty($this->cleaned_data[md5($filename)])) {
+        $isOk = false;
+        
+        foreach($this->files as $filename => $def) {
+            $this->cleaned_data[md5($filename)] = trim($this->cleaned_data[md5($filename)]);
+            if(!empty($this->cleaned_data[md5($filename)])) {
+                $isOk = true;
+            }
+        }
+        
+        if(!empty($this->cleaned_data['content'])) {
+            $isOk = true;
+        }
+        
+        if (!$isOk) {
+            throw new Pluf_Form_Invalid(__('You need to provide your general comment about the proposal, or comments on at least one file.'));
+        }
+        
        return $this->cleaned_data;
    }
-        }
-        throw new Pluf_Form_Invalid(__('You need to provide comments on at least one file.'));
-    }

    function clean_content()
    {
        $content = trim($this->cleaned_data['content']);
-        if (!$this->show_full and strlen($content) == 0) {
-            throw new Pluf_Form_Invalid(__('You need to provide your general comment about the proposal.'));
+        if(empty($content)) {
+            if ($this->fields['status']->initial != $this->fields['status']->value) {
+                return __('The status have been updated.');
            }
+        } else {
            return $content;
        }
        
+        throw new Pluf_Form_Invalid(__('This field is required.'));
+    }

    /**
     * Save the model in the database.
--- a/src/IDF/Form/SourceConf.php
+++ b/src/IDF/Form/SourceConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/TabsConf.php
+++ b/src/IDF/Form/TabsConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/UpdateUpload.php
+++ b/src/IDF/Form/UpdateUpload.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/Upload.php
+++ b/src/IDF/Form/Upload.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/UploadConf.php
+++ b/src/IDF/Form/UploadConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/UserAccount.php
+++ b/src/IDF/Form/UserAccount.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -317,8 +317,15 @@ class IDF_Form_UserAccount  extends Pluf_Form
            return '';
        }

-        if (preg_match('#^ssh\-[a-z]{3}\s\S+(\s\S+)?$#', $key)) {
-            $key = str_replace(array("\n", "\r"), '', $key);
+        $keysearch = '';
+        if (preg_match('#^(ssh\-(?:dss|rsa)\s+\S+)(.*)#', $key, $m)) {
+            $basekey = preg_replace('/\s+/', ' ', $m[1]);
+            $comment = trim(preg_replace('/[\r\n]/', ' ', $m[2]));
+           
+            $keysearch = $basekey.'%';
+            $key = $basekey;
+            if (!empty($comment))
+                $key .= ' '.$comment;

            if (Pluf::f('idf_strong_key_check', false)) {

@@ -337,7 +344,9 @@ class IDF_Form_UserAccount  extends Pluf_Form
                }
            }
        }
-        else if (preg_match('#^\[pubkey [^\]]+\]\s*\S+\s*\[end\]$#', $key)) {
+        else if (preg_match('#^\[pubkey [^\]]+\]\s*(\S+)\s*\[end\]$#', $key, $m)) {
+            $keysearch = '%'.$m[1].'%';
+            
            if (Pluf::f('idf_strong_key_check', false)) {

                // if monotone can read it, it should be valid
@@ -367,7 +376,7 @@ class IDF_Form_UserAccount  extends Pluf_Form
        if ($user) {
            $ruser = Pluf::factory('Pluf_User', $user);
            if ($ruser->id > 0) {
-                $sql = new Pluf_SQL('content=%s', array($key));
+                $sql = new Pluf_SQL('content LIKE %s AND user=%s', array($keysearch, $ruser->id));
                $keys = Pluf::factory('IDF_Key')->getList(array('filter' => $sql->gen()));
                if (count($keys) > 0) {
                    throw new Pluf_Form_Invalid(
--- a/src/IDF/Form/UserChangeEmail.php
+++ b/src/IDF/Form/UserChangeEmail.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/WikiConf.php
+++ b/src/IDF/Form/WikiConf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/WikiCreate.php
+++ b/src/IDF/Form/WikiCreate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/WikiDelete.php
+++ b/src/IDF/Form/WikiDelete.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Form/WikiUpdate.php
+++ b/src/IDF/Form/WikiUpdate.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Gconf.php
+++ b/src/IDF/Gconf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Issue.php
+++ b/src/IDF/Issue.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -169,6 +169,24 @@ class IDF_Issue extends Pluf_Model
        }
    }

+    function getGroupedRelatedIssues($opts = array(), $idsOnly = false)
+    {
+        $rels = $this->get_related_issues_list(array_merge($opts, array(
+               'view' => 'with_other_issue',
+        )));
+
+        $res = array();
+        foreach ($rels as $rel) {
+            $verb = $rel->verb;
+            if (!array_key_exists($verb, $res)) {
+                $res[$verb] = array();
+            }
+            $res[$verb][] = $idsOnly ? $rel->other_issue : $rel;
+        }
+
+        return $res;
+    }
+
    /**
     * Returns an HTML fragment used to display this issue in the
     * timeline.
--- a/src/IDF/IssueComment.php
+++ b/src/IDF/IssueComment.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -155,10 +155,19 @@ class IDF_IssueComment extends Pluf_Model
                    $out .= __('Owner:'); break;
                case 'lb':
                    $out .= __('Labels:'); break;
+                case 'rel':
+                    $out .= __('Relations:'); break;
                }
                $out .= '</strong>&nbsp;';
-                if ($w == 'lb') {
-                    $out .= Pluf_esc(implode(', ', $v));
+                if ($w == 'lb' || $w == 'rel') {
+                    foreach ($v as $t => $ls) {
+                        foreach ($ls as $l) {
+                            if ($t == 'rem') $out .= '<s>';
+                            $out .= Pluf_esc($l);
+                            if ($t == 'rem') $out .= '</s>';
+                            $out .= ' ';
+                        }
+                    }
                } else {
                    $out .= Pluf_esc($v);
                }
--- a/src/IDF/IssueFile.php
+++ b/src/IDF/IssueFile.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/IssueRelation.php
+++ b/src/IDF/IssueRelation.php
@@ -0,0 +1,100 @@
+<?php
+/* -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- */
+/*
+# ***** BEGIN LICENSE BLOCK *****
+# This file is part of InDefero, an open source project management application.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
+#
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+#
+# InDefero is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+#
+# ***** END LICENSE BLOCK ***** */
+
+/**
+ * A relation of one issue to another
+ */
+class IDF_IssueRelation extends Pluf_Model
+{
+    public $_model = __CLASS__;
+
+    function init()
+    {
+        $this->_a['table'] = 'idf_issuerelations';
+        $this->_a['model'] = __CLASS__;
+        $this->_a['cols'] = array(
+                             // It is mandatory to have an "id" column.
+                            'id' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Sequence',
+                                  'blank' => true,
+                                  ),
+                            'issue' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Foreignkey',
+                                  'model' => 'IDF_Issue',
+                                  'blank' => false,
+                                  'verbose' => __('issue'),
+                                  'relate_name' => 'related_issues',
+                                  ),
+                            'verb' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Text',
+                                  'blank' => false,
+                                  'verbose' => __('verb'),
+                                  ),
+                            'other_issue' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Foreignkey',
+                                  'model' => 'IDF_Issue',
+                                  'blank' => false,
+                                  'verbose' => __('other issue'),
+                                  'relate_name' => 'related_other_issues',
+                                  ),
+                            'submitter' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Foreignkey',
+                                  'model' => 'Pluf_User',
+                                  'blank' => false,
+                                  'verbose' => __('submitter'),
+                                   ),
+                            'creation_dtime' =>
+                            array(
+                                  'type' => 'Pluf_DB_Field_Datetime',
+                                  'blank' => true,
+                                  'verbose' => __('creation date'),
+                                  ),
+                            );
+        $this->_a['idx'] = array(
+                            'creation_dtime_idx' =>
+                            array(
+                                  'col' => 'creation_dtime',
+                                  'type' => 'normal',
+                                  ),
+                            );
+        $issuetbl = $this->_con->pfx.'idf_issues';
+        $this->_a['views'] = array(
+            'with_other_issue' => array(
+                'join' => 'INNER JOIN '.$issuetbl.' ON other_issue='.$issuetbl.'.id',
+                'select' => $this->getSelect().', summary',
+                'props' => array('summary' => 'other_summary'),
+        ));
+    }
+
+    function preSave($create=false)
+    {
+        if ($this->id == '') {
+            $this->creation_dtime = gmdate('Y-m-d H:i:s');
+        }
+    }
+}
--- a/src/IDF/Key.php
+++ b/src/IDF/Key.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -80,7 +80,10 @@ class IDF_Key extends Pluf_Model
        if (preg_match('#^\[pubkey ([^\]]+)\]\s*(\S+)\s*\[end\]$#', $this->content, $m)) {
            return array('mtn', $m[1], $m[2]);
        }
-        else if (preg_match('#^ssh\-[a-z]{3}\s(\S+)(?:\s(\S+))?$#', $this->content, $m)) {
+        else if (preg_match('#^ssh\-(?:dss|rsa)\s(\S+)(?:\s(.*))?$#', $this->content, $m)) {
+            if (!isset($m[2])) {
+                $m[2] = "";
+            }
            return array('ssh', $m[2], $m[1]);
        }

--- a/src/IDF/Middleware.php
+++ b/src/IDF/Middleware.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -88,6 +88,7 @@ class IDF_Middleware
                              'showuser' => 'IDF_Template_ShowUser',
                              'ashowuser' => 'IDF_Template_AssignShowUser',
                              'appversion' => 'IDF_Template_AppVersion',
+                              'upload' => 'IDF_Template_Tag_UploadUrl',
                                            ));
        $params['modifiers'] = array_merge($params['modifiers'],
                                           array(
--- a/src/IDF/Migrations/10SshKey.php
+++ b/src/IDF/Migrations/10SshKey.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/11GitCache.php
+++ b/src/IDF/Migrations/11GitCache.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/12DownloadDesc.php
+++ b/src/IDF/Migrations/12DownloadDesc.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/13NewReview.php
+++ b/src/IDF/Migrations/13NewReview.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/14Queue.php
+++ b/src/IDF/Migrations/14Queue.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/15AddGconf.php
+++ b/src/IDF/Migrations/15AddGconf.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/16AddUserMail.php
+++ b/src/IDF/Migrations/16AddUserMail.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/17AddIssueRelations.php
+++ b/src/IDF/Migrations/17AddIssueRelations.php
@@ -0,0 +1,90 @@
+<?php
+/* -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- */
+/*
+# ***** BEGIN LICENSE BLOCK *****
+# This file is part of InDefero, an open source project management application.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
+#
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+#
+# InDefero is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+#
+# ***** END LICENSE BLOCK ***** */
+
+/**
+ * Add the new IDF_IssueRelation model.
+ *
+ */
+
+function IDF_Migrations_17AddIssueRelations_up($params=null)
+{
+    $db = Pluf::db();
+    $schema = new Pluf_DB_Schema($db);
+    $schema->model = new IDF_IssueRelation();
+    $schema->createTables();
+
+    // change the serialization format for added / removed labels in IDF_IssueComment
+    $comments = Pluf::factory('IDF_IssueComment')->getList();
+    foreach ($comments as $comment) {
+        if (!isset($comment->changes['lb'])) continue;
+        $changes = $comment->changes;
+        $adds = $removals = array();
+        foreach ($comment->changes['lb'] as $lb) {
+            if (substr($lb, 0, 1) == '-')
+                $removals[] = substr($lb, 1);
+            else
+                $adds[] = $lb;
+        }
+        $changes['lb'] = array();
+        if (count($adds) > 0)
+            $changes['lb']['add'] = $adds;
+        if (count($removals) > 0)
+            $changes['lb']['rem'] = $removals;
+        $comment->changes = $changes;
+        $comment->update();
+    }
+}
+
+function IDF_Migrations_17AddIssueRelations_down($params=null)
+{
+    $db = Pluf::db();
+    $schema = new Pluf_DB_Schema($db);
+    $schema->model = new IDF_IssueRelation();
+    $schema->dropTables();
+
+    // change the serialization format for added / removed labels in IDF_IssueComment
+    $comments = Pluf::factory('IDF_IssueComment')->getList();
+    foreach ($comments as $comment) {
+        $changes = $comment->changes;
+        if (empty($changes))
+            continue;
+        if (isset($changes['lb'])) {
+            $labels = array();
+            foreach ($changes['lb'] as $type => $lbs) {
+                if (!is_array($lbs)) {
+                    $labels[] = $lbs;
+                    continue;
+                }
+                foreach ($lbs as $lb) {
+                    $labels[] = ($type == 'rem' ? '-' : '') . $lb;
+                }
+            }
+            $changes['lb'] = $labels;
+        }
+        // while we're at it, remove any 'rel' changes
+        unset($changes['rel']);
+        $comment->changes = $changes;
+        $comment->update();
+    }
+}
+
--- a/src/IDF/Migrations/18DownloadMD5.php
+++ b/src/IDF/Migrations/18DownloadMD5.php
@@ -0,0 +1,63 @@
+<?php
+/* -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- */
+/*
+# ***** BEGIN LICENSE BLOCK *****
+# This file is part of InDefero, an open source project management application.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
+#
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+#
+# InDefero is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+#
+# ***** END LICENSE BLOCK ***** */
+
+/**
+ * Add the md5 column for the download model.
+ */
+
+function IDF_Migrations_18DownloadMD5_up($params=null)
+{
+    // Add the row
+    $table = Pluf::factory('IDF_Upload')->getSqlTable();
+    $sql = array();
+    $sql['PostgreSQL'] = 'ALTER TABLE '.$table.' ADD COLUMN "md5" VARCHAR(32) DEFAULT \'\'';
+    $sql['MySQL'] = 'ALTER TABLE '.$table.' ADD COLUMN `md5` VARCHAR(32) DEFAULT \'\'';
+    $db = Pluf::db();
+    $engine = Pluf::f('db_engine');
+    if (!isset($sql[$engine])) {
+        throw new Exception('SQLite complex migration not supported.');
+    }
+    $db->execute($sql[$engine]);
+    
+    // Process md5 of already uploaded file
+    $files = Pluf::factory('IDF_Upload')->getList();
+    foreach ($files as $f) {
+        $f->md5 = md5_file (Pluf::f('upload_path') . '/' . $f->get_project()->shortname . '/files/' . $f->file);
+        $f->update();
+    }
+}
+
+function IDF_Migrations_18DownloadMD5_down($params=null)
+{
+    // Remove the row
+    $table = Pluf::factory('IDF_Upload')->getSqlTable();
+    $sql = array();
+    $sql['PostgreSQL'] = 'ALTER TABLE '.$table.' DROP COLUMN "md5"';
+    $sql['MySQL'] = 'ALTER TABLE '.$table.' DROP COLUMN `md5`';
+    $db = Pluf::db();
+    $engine = Pluf::f('db_engine');
+    if (!isset($sql[$engine])) {
+        throw new Exception('SQLite complex migration not supported.');
+    }
+    $db->execute($sql[$engine]);
+}
--- a/src/IDF/Migrations/1Download.php
+++ b/src/IDF/Migrations/1Download.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/2Search.php
+++ b/src/IDF/Migrations/2Search.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/3Attachments.php
+++ b/src/IDF/Migrations/3Attachments.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/4Timeline.php
+++ b/src/IDF/Migrations/4Timeline.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/5DescToText.php
+++ b/src/IDF/Migrations/5DescToText.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/6PrivateProject.php
+++ b/src/IDF/Migrations/6PrivateProject.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/7Wiki.php
+++ b/src/IDF/Migrations/7Wiki.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/8CodeReview.php
+++ b/src/IDF/Migrations/8CodeReview.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/9ShortDescription.php
+++ b/src/IDF/Migrations/9ShortDescription.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Migrations/Backup.php
+++ b/src/IDF/Migrations/Backup.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -53,6 +53,8 @@ function IDF_Migrations_Backup_run($folder, $name=null)
                    'IDF_Scm_Cache_Git',
                    'IDF_Queue',
                    'IDF_Gconf',
+                    'IDF_EmailAddress',
+                    'IDF_IssueRelation',
                    );
    $db = Pluf::db();
    // Now, for each table, we dump the content in json, this is a
@@ -98,6 +100,8 @@ function IDF_Migrations_Backup_restore($folder, $name)
                    'IDF_Scm_Cache_Git',
                    'IDF_Queue',
                    'IDF_Gconf',
+                    'IDF_EmailAddress',
+                    'IDF_IssueRelation',
                    );
    $db = Pluf::db();
    $schema = new Pluf_DB_Schema($db);
--- a/src/IDF/Migrations/Install.php
+++ b/src/IDF/Migrations/Install.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -51,6 +51,7 @@ function IDF_Migrations_Install_setup($params=null)
                    'IDF_Queue',
                    'IDF_Gconf',
                    'IDF_EmailAddress',
+                    'IDF_IssueRelation',
                    );
    $db = Pluf::db();
    $schema = new Pluf_DB_Schema($db);
@@ -109,6 +110,7 @@ function IDF_Migrations_Install_teardown($params=null)
                    'IDF_Commit',
                    'IDF_Project',
                    'IDF_EmailAddress',
+                    'IDF_IssueRelation',
                    );
    $db = Pluf::db();
    $schema = new Pluf_DB_Schema($db);
--- a/src/IDF/Plugin/SyncGit.php
+++ b/src/IDF/Plugin/SyncGit.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Plugin/SyncGit/Cron.php
+++ b/src/IDF/Plugin/SyncGit/Cron.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -59,6 +59,16 @@ class IDF_Plugin_SyncGit_Cron
                $out .= sprintf($template, $cmd, $key->login, $content)."\n";
            }
        }
+        $out = "# indefero start" . PHP_EOL . $out . "# indefero end" . PHP_EOL;
+        
+        // We update only the part of the file between IDF_START / IDF_END comment
+        $original_keys = file_get_contents($authorized_keys);
+        if (strstr($original_keys, "# indefero start") && strstr($original_keys, "# indefero end")) {
+            $out = preg_replace('/(#\sindefero\sstart).+(#\sindefero\send\s\s?)/isU', 
+                                $out, $original_keys);
+        } else {
+             $out .= $original_keys;   
+        }
        file_put_contents($authorized_keys, $out, LOCK_EX);
    }

--- a/src/IDF/Plugin/SyncGit/Serve.php
+++ b/src/IDF/Plugin/SyncGit/Serve.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Plugin/SyncMercurial.php
+++ b/src/IDF/Plugin/SyncMercurial.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Plugin/SyncMonotone.php
+++ b/src/IDF/Plugin/SyncMonotone.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2010 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -27,6 +27,18 @@
 */
 class IDF_Plugin_SyncMonotone
 {
+    private $old_err_rep = 0;
+
+    public function __construct()
+    {
+        $this->old_err_rep = error_reporting(0);
+    }
+
+    public function __destruct()
+    {
+        error_reporting($this->old_err_rep);
+    }
+
    /**
     * Entry point of the plugin.
     */
@@ -80,24 +92,33 @@ class IDF_Plugin_SyncMonotone
            return;
        }

+        // This guard cleans up on any kind of error, and here is how it works:
+        // As long as the guard is not committed, it keeps a reference to
+        // the given project. When the guard is destroyed and the reference
+        // is still present, it deletes the object. The deletion indirectly
+        // also calls into this plugin again, as the project delete hook
+        // will be called, that removes any changes we've made during the
+        // process.
+        $projectGuard = new IDF_Plugin_SyncMonotone_ModelGuard($project);
+
        $projecttempl = Pluf::f('mtn_repositories', false);
        if ($projecttempl === false) {
-            throw new IDF_Scm_Exception(
-                 __('"mtn_repositories" must be defined in your configuration file.')
+            $this->_diagnoseProblem(
+                 __('"mtn_repositories" must be defined in your configuration file')
            );
        }

        $usher_config = Pluf::f('mtn_usher_conf', false);
        if (!$usher_config || !is_writable($usher_config)) {
-            throw new IDF_Scm_Exception(
-                 __('"mtn_usher_conf" does not exist or is not writable.')
+            $this->_diagnoseProblem(
+                 __('"mtn_usher_conf" does not exist or is not writable')
            );
        }

        $mtnpostpush = realpath(dirname(__FILE__) . '/../../../scripts/mtn-post-push');
        if (!file_exists($mtnpostpush)) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('Could not find mtn-post-push script "%s".'), $mtnpostpush
+            $this->_diagnoseProblem(sprintf(
+                __('Could not find mtn-post-push script "%s"'), $mtnpostpush
            ));
        }

@@ -110,13 +131,12 @@ class IDF_Plugin_SyncMonotone
             'monotonerc.in',
             'remote-automate-permissions.in',
             'hooks.d/',
-             // this is linked and not copied to be able to update
-             // the list of read-only commands on upgrades
-             'hooks.d/indefero_authorize_remote_automate.conf',
             'hooks.d/indefero_authorize_remote_automate.lua',
             'hooks.d/indefero_post_push.conf.in',
             'hooks.d/indefero_post_push.lua',
        );
+        // enable remote command execution of read-only commands
+        // only for public projects
        if (!$project->private) {
            // this is linked and not copied to be able to update
            // the list of read-only commands on upgrades
@@ -131,8 +151,8 @@ class IDF_Plugin_SyncMonotone
        }
        foreach ($confdir_contents as $content) {
            if (!file_exists($confdir.$content)) {
-                throw new IDF_Scm_Exception(sprintf(
-                    __('The configuration file %s is missing.'), $content
+                $this->_diagnoseProblem(sprintf(
+                    __('The configuration file "%s" is missing'), $content
                ));
            }
        }
@@ -140,14 +160,15 @@ class IDF_Plugin_SyncMonotone
        $shortname = $project->shortname;
        $projectpath = sprintf($projecttempl, $shortname);
        if (file_exists($projectpath)) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('The project path %s already exists.'), $projectpath
+            $this->_diagnoseProblem(sprintf(
+                __('The project path "%s" already exists'), $projectpath
            ));
        }

-        if (!mkdir($projectpath)) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('The project path %s could not be created.'), $projectpath
+        if (!@mkdir($projectpath)) {
+            $this->_diagnoseProblem(sprintf(
+                __('The project path "%s" could not be created'),
+                $projectpath
            ));
        }

@@ -156,7 +177,7 @@ class IDF_Plugin_SyncMonotone
        //
        $dbfile = $projectpath.'/database.mtn';
        $cmd = sprintf('db init -d %s', escapeshellarg($dbfile));
-        self::_mtn_exec($cmd);
+        $this->_mtn_exec($cmd);

        //
        // step 2) create a server key
@@ -175,16 +196,17 @@ class IDF_Plugin_SyncMonotone
            escapeshellarg($projectpath),
            escapeshellarg($serverkey)
        );
-        self::_mtn_exec($cmd);
+        $this->_mtn_exec($cmd);

        //
        // step 3) create a client key, and save it in IDF
        //
        $keydir = Pluf::f('tmp_folder').'/mtn-client-keys';
        if (!file_exists($keydir)) {
-            if (!mkdir($keydir)) {
-                throw new IDF_Scm_Exception(sprintf(
-                    __('The key directory %s could not be created.'), $keydir
+            if (!@mkdir($keydir)) {
+                $this->_diagnoseProblem(sprintf(
+                    __('The key directory "%s" could not be created'),
+                    $keydir
                ));
            }
        }
@@ -194,14 +216,14 @@ class IDF_Plugin_SyncMonotone
            escapeshellarg($keydir),
            escapeshellarg($clientkey_name)
        );
-        $keyinfo = self::_mtn_exec($cmd);
+        $keyinfo = $this->_mtn_exec($cmd);

        $parsed_keyinfo = array();
        try {
            $parsed_keyinfo = IDF_Scm_Monotone_BasicIO::parse($keyinfo);
        }
        catch (Exception $e) {
-            throw new IDF_Scm_Exception(sprintf(
+            $this->_diagnoseProblem(sprintf(
                __('Could not parse key information: %s'), $e->getMessage()
            ));
        }
@@ -219,13 +241,13 @@ class IDF_Plugin_SyncMonotone
            escapeshellarg($keydir),
            escapeshellarg($clientkey_hash)
        );
-        $clientkey_pubdata = self::_mtn_exec($cmd);
+        $clientkey_pubdata = $this->_mtn_exec($cmd);

        $cmd = sprintf('au put_public_key --db=%s %s',
            escapeshellarg($dbfile),
            escapeshellarg($clientkey_pubdata)
        );
-        self::_mtn_exec($cmd);
+        $this->_mtn_exec($cmd);

        //
        // step 4) setup the configuration
@@ -238,18 +260,20 @@ class IDF_Plugin_SyncMonotone
        foreach ($confdir_contents as $content) {
            $filepath = $projectpath.'/'.$content;
            if (substr($content, -1) == '/') {
-                if (!mkdir($filepath)) {
-                    throw new IDF_Scm_Exception(sprintf(
-                        __('Could not create configuration directory "%s"'), $filepath
+                if (!@mkdir($filepath)) {
+                    $this->_diagnoseProblem(sprintf(
+                        __('Could not create configuration directory "%s"'),
+                        $filepath
                    ));
                }
                continue;
            }

            if (substr($content, -3) != '.in') {
-                if (!symlink($confdir.$content, $filepath)) {
-                    IDF_Scm_Exception(sprintf(
-                        __('Could not create symlink "%s"'), $filepath
+                if (!@symlink($confdir.$content, $filepath)) {
+                    $this->_diagnoseProblem(sprintf(
+                        __('Could not create symlink for configuration file "%s"'),
+                        $filepath
                    ));
                }
                continue;
@@ -264,9 +288,10 @@ class IDF_Plugin_SyncMonotone

            // remove the .in
            $filepath = substr($filepath, 0, -3);
-            if (file_put_contents($filepath, $filecontents, LOCK_EX) === false) {
-                throw new IDF_Scm_Exception(sprintf(
-                    __('Could not write configuration file "%s"'), $filepath
+            if (@file_put_contents($filepath, $filecontents, LOCK_EX) === false) {
+                $this->_diagnoseProblem(sprintf(
+                    __('Could not write configuration file "%s"'),
+                    $filepath
                ));
            }
        }
@@ -280,7 +305,7 @@ class IDF_Plugin_SyncMonotone
            $parsed_config = IDF_Scm_Monotone_BasicIO::parse($usher_rc);
        }
        catch (Exception $e) {
-            throw new IDF_Scm_Exception(sprintf(
+            $this->_diagnoseProblem(sprintf(
                __('Could not parse usher configuration in "%s": %s'),
                $usher_config, $e->getMessage()
            ));
@@ -291,7 +316,7 @@ class IDF_Plugin_SyncMonotone
            foreach ($stanzas as $stanza_line) {
                if ($stanza_line['key'] == 'server' &&
                    $stanza_line['values'][0] == $shortname) {
-                    throw new IDF_Scm_Exception(sprintf(
+                    $this->_diagnoseProblem(sprintf(
                        __('usher configuration already contains a server '.
                           'entry named "%s"'),
                        $shortname
@@ -315,9 +340,10 @@ class IDF_Plugin_SyncMonotone

        // FIXME: more sanity - what happens on failing writes? we do not
        // have a backup copy of usher.conf around...
-        if (file_put_contents($usher_config, $usher_rc, LOCK_EX) === false) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('Could not write usher configuration file "%s"'), $usher_config
+        if (@file_put_contents($usher_config, $usher_rc, LOCK_EX) === false) {
+            $this->_diagnoseProblem(sprintf(
+                __('Could not write usher configuration file "%s"'),
+                $usher_config
            ));
        }

@@ -325,6 +351,9 @@ class IDF_Plugin_SyncMonotone
        // step 6) reload usher to pick up the new configuration
        //
        IDF_Scm_Monotone_Usher::reload();
+
+        // commit the guard, so the newly created project is not deleted
+        $projectGuard->commit();
    }

    /**
@@ -345,8 +374,8 @@ class IDF_Plugin_SyncMonotone
        $mtn = IDF_Scm_Monotone::factory($project);
        $stdio = $mtn->getStdio();

-        $projectpath = self::_get_project_path($project);
-        $auth_ids    = self::_get_authorized_user_ids($project);
+        $projectpath = $this->_get_project_path($project);
+        $auth_ids    = $this->_get_authorized_user_ids($project);
        $key_ids     = array();
        foreach ($auth_ids as $auth_id) {
            $sql = new Pluf_SQL('user=%s', array($auth_id));
@@ -361,9 +390,10 @@ class IDF_Plugin_SyncMonotone

        $write_permissions = implode("\n", $key_ids);
        $rcfile = $projectpath.'/write-permissions';
-        if (file_put_contents($rcfile, $write_permissions, LOCK_EX) === false) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('Could not write write-permissions file "%s"'), $rcfile
+        if (@file_put_contents($rcfile, $write_permissions, LOCK_EX) === false) {
+            $this->_diagnoseProblem(sprintf(
+                __('Could not write write-permissions file "%s"'),
+                $rcfile
            ));
        }

@@ -382,11 +412,13 @@ class IDF_Plugin_SyncMonotone
                array('key' => 'allow', 'values' => array('*')),
            );
        }
+
        $read_permissions = IDF_Scm_Monotone_BasicIO::compile(array($stanza));
        $rcfile = $projectpath.'/read-permissions';
-        if (file_put_contents($rcfile, $read_permissions, LOCK_EX) === false) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('Could not write read-permissions file "%s"'), $rcfile
+        if (@file_put_contents($rcfile, $read_permissions, LOCK_EX) === false) {
+            $this->_diagnoseProblem(sprintf(
+                __('Could not write read-permissions file "%s"'),
+                $rcfile
            ));
        }

@@ -401,16 +433,16 @@ class IDF_Plugin_SyncMonotone

        $serverRestartRequired = false;
        if ($project->private && file_exists($projectfile) && is_link($projectfile)) {
-            if (!unlink($projectfile)) {
-                IDF_Scm_Exception(sprintf(
+            if (!@unlink($projectfile)) {
+                $this->_diagnoseProblem(sprintf(
                    __('Could not remove symlink "%s"'), $projectfile
                ));
            }
            $serverRestartRequired = true;
        } else
        if (!$project->private && !file_exists($projectfile)) {
-            if (!symlink($templatefile, $projectfile)) {
-                throw new IDF_Scm_Exception(sprintf(
+            if (!@symlink($templatefile, $projectfile)) {
+                $this->_diagnoseProblem(sprintf(
                    __('Could not create symlink "%s"'), $projectfile
                ));
            }
@@ -422,6 +454,9 @@ class IDF_Plugin_SyncMonotone
            // seems to be ignored when the server should be started
            // again immediately afterwards
            IDF_Scm_Monotone_Usher::killServer($project->shortname);
+            // give usher some time to cool down, otherwise it might hang
+            // (see https://code.monotone.ca/p/contrib/issues/175/)
+            sleep(2);
            IDF_Scm_Monotone_Usher::startServer($project->shortname);
        }
    }
@@ -443,8 +478,8 @@ class IDF_Plugin_SyncMonotone

        $usher_config = Pluf::f('mtn_usher_conf', false);
        if (!$usher_config || !is_writable($usher_config)) {
-            throw new IDF_Scm_Exception(
-                 __('"mtn_usher_conf" does not exist or is not writable.')
+            $this->_diagnoseProblem(
+                 __('"mtn_usher_conf" does not exist or is not writable')
            );
        }

@@ -453,16 +488,16 @@ class IDF_Plugin_SyncMonotone

        $projecttempl = Pluf::f('mtn_repositories', false);
        if ($projecttempl === false) {
-            throw new IDF_Scm_Exception(
-                 __('"mtn_repositories" must be defined in your configuration file.')
+            $this->_diagnoseProblem(
+                 __('"mtn_repositories" must be defined in your configuration file')
            );
        }

        $projectpath = sprintf($projecttempl, $shortname);
        if (file_exists($projectpath)) {
-            if (!self::_delete_recursive($projectpath)) {
-                throw new IDF_Scm_Exception(sprintf(
-                    __('One or more paths underknees %s could not be deleted.'), $projectpath
+            if (!$this->_delete_recursive($projectpath)) {
+                $this->_diagnoseProblem(sprintf(
+                    __('One or more paths underneath %s could not be deleted'), $projectpath
                ));
            }
        }
@@ -473,8 +508,9 @@ class IDF_Plugin_SyncMonotone
        if ($keyname && $keyhash &&
            file_exists($keydir .'/'. $keyname . '.' . $keyhash)) {
            if (!@unlink($keydir .'/'. $keyname . '.' . $keyhash)) {
-                throw new IDF_Scm_Exception(sprintf(
-                    __('Could not delete client private key %s'), $keyname
+                $this->_diagnoseProblem(sprintf(
+                    __('Could not delete client private key "%s"'),
+                    $keyname
                ));
            }
        }
@@ -485,7 +521,7 @@ class IDF_Plugin_SyncMonotone
            $parsed_config = IDF_Scm_Monotone_BasicIO::parse($usher_rc);
        }
        catch (Exception $e) {
-            throw new IDF_Scm_Exception(sprintf(
+            $this->_diagnoseProblem(sprintf(
                __('Could not parse usher configuration in "%s": %s'),
                $usher_config, $e->getMessage()
            ));
@@ -505,9 +541,10 @@ class IDF_Plugin_SyncMonotone

        // FIXME: more sanity - what happens on failing writes? we do not
        // have a backup copy of usher.conf around...
-        if (file_put_contents($usher_config, $usher_rc, LOCK_EX) === false) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('Could not write usher configuration file "%s"'), $usher_config
+        if (@file_put_contents($usher_config, $usher_rc, LOCK_EX) === false) {
+            $this->_diagnoseProblem(sprintf(
+                __('Could not write usher configuration file "%s"'),
+                $usher_config
            ));
        }

@@ -528,6 +565,8 @@ class IDF_Plugin_SyncMonotone
            return;
        }

+        $keyGuard = new IDF_Plugin_SyncMonotone_ModelGuard($key);
+
        foreach (Pluf::factory('IDF_Project')->getList() as $project) {
            $conf = new IDF_Conf();
            $conf->setProject($project);
@@ -535,8 +574,8 @@ class IDF_Plugin_SyncMonotone
            if ($scm != 'mtn')
                continue;

-            $projectpath = self::_get_project_path($project);
-            $auth_ids    = self::_get_authorized_user_ids($project);
+            $projectpath = $this->_get_project_path($project);
+            $auth_ids    = $this->_get_authorized_user_ids($project);
            if (!in_array($key->user, $auth_ids))
                continue;

@@ -556,7 +595,7 @@ class IDF_Plugin_SyncMonotone
                    $parsed_read_perms = IDF_Scm_Monotone_BasicIO::parse($read_perms);
                }
                catch (Exception $e) {
-                    throw new IDF_Scm_Exception(sprintf(
+                    $this->_diagnoseProblem(sprintf(
                        __('Could not parse read-permissions for project "%s": %s'),
                        $shortname, $e->getMessage()
                    ));
@@ -598,10 +637,11 @@ class IDF_Plugin_SyncMonotone

                $read_perms = IDF_Scm_Monotone_BasicIO::compile($parsed_read_perms);

-                if (file_put_contents($projectpath.'/read-permissions',
+                if (@file_put_contents($projectpath.'/read-permissions',
                                      $read_perms, LOCK_EX) === false) {
-                    throw new IDF_Scm_Exception(sprintf(
-                        __('Could not write read-permissions for project "%s"'), $shortname
+                    $this->_diagnoseProblem(sprintf(
+                        __('Could not write read-permissions for project "%s"'),
+                        $shortname
                    ));
                }
            }
@@ -611,9 +651,9 @@ class IDF_Plugin_SyncMonotone
            if (!in_array('*', $lines) && !in_array($mtn_key_id, $lines)) {
                $lines[] = $mtn_key_id;
            }
-            if (file_put_contents($projectpath.'/write-permissions',
+            if (@file_put_contents($projectpath.'/write-permissions',
                                  implode("\n", $lines) . "\n", LOCK_EX) === false) {
-                throw new IDF_Scm_Exception(sprintf(
+                $this->_diagnoseProblem(sprintf(
                    __('Could not write write-permissions file for project "%s"'),
                    $shortname
                ));
@@ -623,6 +663,8 @@ class IDF_Plugin_SyncMonotone
            $stdio = $mtn->getStdio();
            $stdio->exec(array('put_public_key', $key->content));
        }
+
+        $keyGuard->commit();
    }

    /**
@@ -651,8 +693,8 @@ class IDF_Plugin_SyncMonotone
            if ($scm != 'mtn')
                continue;

-            $projectpath = self::_get_project_path($project);
-            $auth_ids    = self::_get_authorized_user_ids($project);
+            $projectpath = $this->_get_project_path($project);
+            $auth_ids    = $this->_get_authorized_user_ids($project);
            if (!in_array($key->user, $auth_ids))
                continue;

@@ -672,7 +714,7 @@ class IDF_Plugin_SyncMonotone
                    $parsed_read_perms = IDF_Scm_Monotone_BasicIO::parse($read_perms);
                }
                catch (Exception $e) {
-                    throw new IDF_Scm_Exception(sprintf(
+                    $this->_diagnoseProblem(sprintf(
                        __('Could not parse read-permissions for project "%s": %s'),
                        $shortname, $e->getMessage()
                    ));
@@ -693,10 +735,11 @@ class IDF_Plugin_SyncMonotone

                $read_perms = IDF_Scm_Monotone_BasicIO::compile($parsed_read_perms);

-                if (file_put_contents($projectpath.'/read-permissions',
+                if (@file_put_contents($projectpath.'/read-permissions',
                                      $read_perms, LOCK_EX) === false) {
-                    throw new IDF_Scm_Exception(sprintf(
-                        __('Could not write read-permissions for project "%s"'), $shortname
+                    $this->_diagnoseProblem(sprintf(
+                        __('Could not write read-permissions for project "%s"'),
+                        $shortname
                    ));
                }
            }
@@ -711,9 +754,9 @@ class IDF_Plugin_SyncMonotone
                    continue;
                }
            }
-            if (file_put_contents($projectpath.'/write-permissions',
+            if (@file_put_contents($projectpath.'/write-permissions',
                                   implode("\n", $lines) . "\n", LOCK_EX) === false) {
-                throw new IDF_Scm_Exception(sprintf(
+                $this->_diagnoseProblem(sprintf(
                    __('Could not write write-permissions file for project "%s"'),
                    $shortname
                ));
@@ -762,7 +805,43 @@ class IDF_Plugin_SyncMonotone
        ));
    }

-    private static function _get_authorized_user_ids($project)
+    private function _get_project_path($project)
+    {
+        $projecttempl = Pluf::f('mtn_repositories', false);
+        if ($projecttempl === false) {
+            $this->_diagnoseProblem(
+                 __('"mtn_repositories" must be defined in your configuration file.')
+            );
+        }
+
+        $projectpath = sprintf($projecttempl, $project->shortname);
+        if (!file_exists($projectpath)) {
+            $this->_diagnoseProblem(sprintf(
+                __('The project path %s does not exists.'), $projectpath
+            ));
+        }
+        return $projectpath;
+    }
+
+    private function _mtn_exec($cmd)
+    {
+        $fullcmd = sprintf('%s %s %s',
+            Pluf::f('idf_exec_cmd_prefix', ''),
+            Pluf::f('mtn_path', 'mtn'),
+            $cmd
+        );
+
+        $output = $return = null;
+        exec($fullcmd, $output, $return);
+        if ($return != 0) {
+            $this->_diagnoseProblem(sprintf(
+                __('The command "%s" could not be executed.'), $cmd
+            ));
+        }
+        return implode("\n", $output);
+    }
+
+    private function _get_authorized_user_ids($project)
    {
        $mem = $project->getMembershipData();
        $members = array_merge((array)$mem['members'],
@@ -775,43 +854,7 @@ class IDF_Plugin_SyncMonotone
        return $userids;
    }

-    private static function _get_project_path($project)
-    {
-        $projecttempl = Pluf::f('mtn_repositories', false);
-        if ($projecttempl === false) {
-            throw new IDF_Scm_Exception(
-                 __('"mtn_repositories" must be defined in your configuration file.')
-            );
-        }
-
-        $projectpath = sprintf($projecttempl, $project->shortname);
-        if (!file_exists($projectpath)) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('The project path %s does not exists.'), $projectpath
-            ));
-        }
-        return $projectpath;
-    }
-
-    private static function _mtn_exec($cmd)
-    {
-        $fullcmd = sprintf('%s %s %s',
-            Pluf::f('idf_exec_cmd_prefix', ''),
-            Pluf::f('mtn_path', 'mtn'),
-            $cmd
-        );
-
-        $output = $return = null;
-        exec($fullcmd, $output, $return);
-        if ($return != 0) {
-            throw new IDF_Scm_Exception(sprintf(
-                __('The command "%s" could not be executed.'), $cmd
-            ));
-        }
-        return implode("\n", $output);
-    }
-
-    private static function _delete_recursive($path)
+    private function _delete_recursive($path)
    {
        if (is_file($path) || is_link($path)) {
            return @unlink($path);
@@ -821,10 +864,48 @@ class IDF_Plugin_SyncMonotone
            $scan = glob(rtrim($path, '/') . '/*');
            $status = 0;
            foreach ($scan as $subpath) {
-                $status |= self::_delete_recursive($subpath);
+                $status |= $this->_delete_recursive($subpath);
            }
-            $status |= rmdir($path);
+            $status |= @rmdir($path);
            return $status;
        }
    }
+
+    private function _diagnoseProblem($msg)
+    {
+        $system_err = error_get_last();
+        if (!empty($system_err)) {
+            $msg .= ': '.$system_err['message'];
+        }
+
+        error_reporting($this->old_err_rep);
+        throw new IDF_Scm_Exception($msg);
+    }
 }
+
+/**
+ * A simple helper class that deletes the model instance if
+ * it is not committed
+ */
+class IDF_Plugin_SyncMonotone_ModelGuard
+{
+    private $model;
+
+    public function __construct(Pluf_Model $m)
+    {
+        $this->model = $m;
+    }
+
+    public function __destruct()
+    {
+        if ($this->model == null)
+            return;
+        $this->model->delete();
+    }
+
+    public function commit()
+    {
+        $this->model = null;
+    }
+}
+
--- a/src/IDF/Plugin/SyncMonotone/hooks.d/indefero_authorize_remote_automate.lua
+++ b/src/IDF/Plugin/SyncMonotone/hooks.d/indefero_authorize_remote_automate.lua
@@ -1,6 +1,6 @@
 -- ***** BEGIN LICENSE BLOCK *****
 -- This file is part of InDefero, an open source project management application.
-- Copyright (C) 2011 Céondo Ltd and contributors.
+-- Copyright (C) 2008-2011 Céondo Ltd and contributors.
 -- Copyright (C) 2010 Thomas Keller <me@thomaskeller.biz>
 --                    Richard Levitte <richard@levitte.org>
 --
--- a/src/IDF/Plugin/SyncMonotone/hooks.d/indefero_post_push.lua
+++ b/src/IDF/Plugin/SyncMonotone/hooks.d/indefero_post_push.lua
@@ -1,6 +1,6 @@
 -- ***** BEGIN LICENSE BLOCK *****
 -- This file is part of InDefero, an open source project management application.
-- Copyright (C) 2011 Céondo Ltd and contributors.
+-- Copyright (C) 2008-2011 Céondo Ltd and contributors.
 --
 -- InDefero is free software; you can redistribute it and/or modify
 -- it under the terms of the GNU General Public License as published by
--- a/src/IDF/Plugin/SyncMonotone/monotonerc.in
+++ b/src/IDF/Plugin/SyncMonotone/monotonerc.in
@@ -1,6 +1,6 @@
 -- ***** BEGIN LICENSE BLOCK *****
 -- This file is part of InDefero, an open source project management application.
-- Copyright (C) 2011 Céondo Ltd and contributors.
+-- Copyright (C) 2008-2011 Céondo Ltd and contributors.
 --
 -- InDefero is free software; you can redistribute it and/or modify
 -- it under the terms of the GNU General Public License as published by
--- a/src/IDF/Plugin/SyncSvn.php
+++ b/src/IDF/Plugin/SyncSvn.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Precondition.php
+++ b/src/IDF/Precondition.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Project.php
+++ b/src/IDF/Project.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -133,6 +133,46 @@ class IDF_Project extends Pluf_Model
        return $projects[0];
    }
    
+    /**
+     * Returns the number of open/closed issues.
+     *
+     * @param string Status ('open'), 'closed'
+     * @param IDF_Tag Subfilter with a label (null)
+     * @return int Count
+     */
+    public function getIssueCountByOwner($status='open')
+    {
+        switch ($status) {
+        case 'open':
+            $tags = implode(',', $this->getTagIdsByStatus('open'));
+            break;
+        case 'closed':
+        default:
+            $tags = implode(',', $this->getTagIdsByStatus('closed'));
+            break;
+        }
+        $sqlIssueTable = Pluf::factory('IDF_Issue')->getSqlTable();
+        $query = "SELECT uid AS id,COUNT(uid) AS nb
+FROM (
+    SELECT COALESCE(owner, -1) AS uid
+    FROM $sqlIssueTable
+    WHERE status IN ($tags)
+    ) AS ff
+GROUP BY uid";
+
+        $db = Pluf::db();
+        $dbData = $db->select($query);
+        $ownerStatistics = array();
+        foreach ($dbData as $k => $v) {
+            $key = ($v['id'] === '-1') ? null : $v['id'];
+            $ownerStatistics[$key] = (int)$v['nb'];
+        }
+        
+        arsort($ownerStatistics);
+
+        return $ownerStatistics;
+    }
+
    /**
     * Returns the number of open/closed issues.
     *
@@ -233,6 +273,29 @@ class IDF_Project extends Pluf_Model
        return $tags;
    }

+    /**
+     * Returns a list of relations which are available in this project as
+     * associative array. Each key-value pair marks a set of orthogonal
+     * relations. To ease processing, each of these pairs is included twice
+     * in the array, once as key1 => key2 and once as key2 => key1.
+     *
+     * @return array List of relation names
+     */
+    public function getRelationsFromConfig()
+    {
+        $conf = $this->getConf();
+        $rel = $conf->getVal('issue_relations', IDF_Form_IssueTrackingConf::init_relations);
+        $relations = array();
+        foreach (preg_split("/\015\012|\015|\012/", $rel, -1, PREG_SPLIT_NO_EMPTY) as $s) {
+            $verbs = preg_split("/\s*,\s*/", $s, 2);
+            if (count($verbs) == 1)
+                $relations += array($verbs[0] => $verbs[0]);
+            else
+                $relations += array($verbs[0] => $verbs[1], $verbs[1] => $verbs[0]);
+        }
+        return $relations;
+    }
+
    /**
     * Return membership data.
     *
--- a/src/IDF/Queue.php
+++ b/src/IDF/Queue.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Review.php
+++ b/src/IDF/Review.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Review/Comment.php
+++ b/src/IDF/Review/Comment.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Review/FileComment.php
+++ b/src/IDF/Review/FileComment.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Review/Patch.php
+++ b/src/IDF/Review/Patch.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Scm.php
+++ b/src/IDF/Scm.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -88,22 +88,36 @@ class IDF_Scm
    }

    /**
-     * Run exec and log some information.
+     * Runs the given command and log some information.
+     *
+     * A previous version used plain exec(), but this should not be used
+     * for various reasons, one being that this command does not preserve
+     * trailing whitespace, which is essential for proper diff parsing.
     *
     * @param $caller Calling method
     * @param $cmd Command to run
     * @param &$out Array of output
     * @param &$return Return value
-     * @return string Last line of the command
     */
    public static function exec($caller, $cmd, &$out=null, &$return=null)
    {
+        $return = -1;
        Pluf_Log::stime('timer');
-        $ret = exec($cmd, $out, $return);
+        $fp = popen($cmd, 'r');
+        $buf = '';
+        if ($fp !== false) {
+            while (!feof($fp)) {
+                $buf .= fread($fp, 1024);
+            }
+            $return = pclose($fp);
+        }
+        $out = preg_split('/\r\n|\r|\n/', $buf);
+        $elem = count($out);
+        if ($elem > 0 && $out[$elem-1] === '')
+            unset($out[$elem-1]);
        Pluf_Log::perf(array($caller, $cmd, Pluf_Log::etime('timer', 'total_exec')));
        Pluf_Log::debug(array($caller, $cmd, $out));
        Pluf_Log::inc('exec_calls');
-        return $ret;
    }

    /**
@@ -325,7 +339,8 @@ class IDF_Scm
     * stdClass object {
     *  'additions' => array('path/to/file', 'path/to/directory', ...),
     *  'deletions' => array('path/to/file', 'path/to/directory', ...),
-     *  'renames' => array('old/path/to/file' => 'new/path/to/file', ...)
+     *  'renames' => array('old/path/to/file' => 'new/path/to/file', ...),
+     *  'copies' => array('path/to/source' => 'path/to/target', ...),
     *  'patches' => array('path/to/file', ...),
     *  'properties' => array('path/to/file' => array(
     *              'propname' => 'propvalue', 'deletedprop' => null, ...)
--- a/src/IDF/Scm/Cache/Git.php
+++ b/src/IDF/Scm/Cache/Git.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/src/IDF/Scm/Exception.php
+++ b/src/IDF/Scm/Exception.php
@@ -3,7 +3,7 @@
 /*
 # ***** BEGIN LICENSE BLOCK *****
 # This file is part of InDefero, an open source project management application.
-# Copyright (C) 2008 Céondo Ltd and contributors.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
 #
 # InDefero is free software; you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
--- a/Show More
+++ b/Show More