Release 1.3.2.

reside as well) and make it static
- refactor out the code from getProjects that determines which projects
  are visible by a user and use the same code to restrict the count that
  we calculate for all available project tags
- calculating the project stats is now no longer O(5n) but simply O(5)
  when it comes to SQL queries (where n is the number of filtered projects);
  remove the member statistic since it makes no sense in this context

AUTHORS

@@ -22,6 +22,7 @@ Much appreciated contributors (in alphabetical order):
     Janez Troha <http://www.dz0ny.info>             - Slovenian translation
     Jean-Philippe Fleury <jpfleury>
     Jerry <lxb429@gmail.com>                        - Chinese translation
+    Jonathan Aillet <jonathan.aillet@gmail.com>     - French translation
     Julien Issler <julien@issler.net>
     Litew <litew9@gmail.com>                        - Russian translation
     Ludovic Bellière <xrogaan>

NEWS.mdtext

@@ -1,4 +1,25 @@
-# InDefero 1.3 - Sun Apr 15 21:10 2011 UTC
+# InDefero 1.3.2 - Wed May 09 20:05 2012 UTC
+
+## Bugfixes
+
+- Fix two bugs in the project list view if no project
+  is visible to the user or available in the forge (issue 805)
+
+# InDefero 1.3.1 - Sun May 06 20:32 2012 UTC
+
+## Bugfixes
+
+- Compatiblity fixes for PostgreSQL (issue 800)
+- Fix TOC generation in wiki (issue 803)
+- Make the display of large files and diffs faster (issue 804)
+- Make the project list faster and its tag list more accurate by not
+  counting projects that are invisible to the current user
+
+## Language and Translations
+
+- French translation updated (thanks to Jonathan Aillet!)
+
+# InDefero 1.3 - Sun Apr 15 21:10 2012 UTC
 
 This new major release of Indefero is possible thanks to the sponsor of
 [Scilab Enterprises](http://www.scilab-enterprises.com/).
@@ -34,7 +55,7 @@ or newer to properly run this version of Indefero!
   emails for one object are uniquely identifyable to support a grouped view
   in email clients that support that. (fixes issues  334, 452, 480, and 791)
 - Indefero can now be configured to record activity metrics for all projects
-  in a forge. This needs a special cron job named 'activitycron.php` 
+  in a forge. This needs a special cron job named `activitycron.php` 
   (under `scripts`) that is run on a regular basis. The metrics can be
   fine-tuned via `activity_section_weights` and `activity_lookback` in
   `idf.php` and the result is visible as green bar in the project list view.

run-tests

@@ -2,7 +2,7 @@
 <?php
 
 $xmlfile = dirname(__FILE__) .'/test/report.xml';
-passthru('phpunit --coverage-clover='.$xmlfile);
+passthru('phpunit --coverage-clover='.escapeshellarg($xmlfile));
 $xml = simplexml_load_string(file_get_contents($xmlfile));
 unlink($xmlfile);
 printf(

src/IDF/ActivityTaxonomy.php

@@ -44,10 +44,15 @@ class IDF_ActivityTaxonomy
 {
     public static function recalculateTaxnomies(DateTime $date)
     {
+        $sectionWeights = Pluf::f('activity_section_weights', null);
+        $lookback = Pluf::f('activity_lookback', null);
+        if ($sectionWeights === null || $lookback === null) {
+            throw new LogicException('activity configuration is missing in idf.php');
+        }
+
         //
         // query and normalize the section weights
         //
-        $sectionWeights = Pluf::f('activity_section_weights', array());
         $allWeights = array_sum($sectionWeights);
         if ($allWeights == 0) {
             throw new LogicException('the sum of all "activity_section_weights" must not be 0');
@@ -59,7 +64,6 @@ class IDF_ActivityTaxonomy
         //
         // determine the date boundaries
         //
-        $lookback = Pluf::f('activity_lookback', 0);
         if ($lookback < 1) {
             throw new LogicException('lookback must be greater or equal to 1');
         }
@@ -141,7 +145,12 @@ class IDF_ActivityTaxonomy
 
         $cache[$argIdent] = 0;
         list($higher, $lower) = $dateBoundaries;
-        $sql = new Pluf_SQL('model_class IN ("'.implode('","', $classes).'") '.
+        $db = Pluf::db();
+        $classes_esc = array();
+        foreach ($classes as $class) {
+            $classes_esc[] = $db->esc($class);
+        }
+        $sql = new Pluf_SQL('model_class IN ('.implode(',', $classes_esc).') '.
                             'AND creation_dtime >= %s AND creation_dtime <= %s',
                          array($lower, $higher));
 

src/IDF/FileUtil.php

@@ -147,7 +147,7 @@ class IDF_FileUtil
      * Splits a string into separate lines while retaining the individual
      * line ending character for every line.
      *
-     * OS9 line endings are not supported.
+     * OS 9 line endings are not supported.
      *
      * @param string content
      * @param boolean if true, skip completely empty lines
@@ -155,19 +155,16 @@ class IDF_FileUtil
      */
     public static function splitIntoLines($content, $skipEmpty = false)
     {
-        $flags = PREG_SPLIT_OFFSET_CAPTURE;
+        $last_off = 0;
-        if ($skipEmpty) $flags |= PREG_SPLIT_NO_EMPTY;
-        $splitted = preg_split("/\r\n|\n/", $content, -1, $flags);
-
-        $last_off = -1;
         $lines = array();
-        while (($split = array_shift($splitted)) !== null) {
+        while (preg_match("/\r\n|\n/", $content, $m, PREG_OFFSET_CAPTURE, $last_off)) {
-            if ($last_off != -1) {
+            $next_off = strlen($m[0][0]) + $m[0][1];
-                $lines[] .= substr($content, $last_off, $split[1] - $last_off);
+            $line = substr($content, $last_off, $next_off - $last_off);
-            }
+            $last_off = $next_off;
-            $last_off = $split[1];
+            if ($line !== $m[0][0] || !$skipEmpty) $lines[] = $line;
         }
-        $lines[] = substr($content, $last_off);
+        $line = substr($content, $last_off);
+        if ($line !== false && strlen($line) > 0) $lines[] = $line;
         return $lines;
     }
 

src/IDF/Forge.php

@@ -52,31 +52,6 @@ class IDF_Forge
         $this->conf->setVal('project_labels', $labels);
     }
 
-    public function getProjectLabelsWithCounts() {
-        $sql = new Pluf_SQL('project=0');
-        $tagList = Pluf::factory('IDF_Tag')->getList(array(
-            'filter' => $sql->gen(),
-            'view' => 'join_projects',
-            'order' => 'class ASC, lcname ASC'
-        ));
-
-        $maxProjectCount = 0;
-        foreach ($tagList as $tag) {
-            $maxProjectCount = max($maxProjectCount, $tag->project_count);
-        }
-
-        $tags = array();
-        foreach ($tagList as $tag) {
-            // group by class
-            if (!array_key_exists($tag->class, $tags)) {
-                $tags[$tag->class] = array();
-            }
-            $tag->rel_project_count = $tag->project_count / (double) $maxProjectCount;
-            $tags[$tag->class][] = $tag;
-        }
-        return $tags;
-    }
-
     public function setCustomForgePageEnabled($enabled) {
         $this->conf->setVal('custom_forge_page_enabled', $enabled);
     }
@@ -92,4 +67,4 @@ class IDF_Forge
     public function setCustomForgePageContent($content) {
         $this->conf->setVal('custom_forge_page_content', $content);
     }
-}
+}

src/IDF/Migrations/25NullableProjectInTag.php

@@ -0,0 +1,46 @@
+<?php
+/* -*- tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- */
+/*
+# ***** BEGIN LICENSE BLOCK *****
+# This file is part of InDefero, an open source project management application.
+# Copyright (C) 2008-2011 Céondo Ltd and contributors.
+#
+# InDefero is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2 of the License, or
+# (at your option) any later version.
+#
+# InDefero is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301  USA
+#
+# ***** END LICENSE BLOCK ***** */
+
+function IDF_Migrations_25NullableProjectInTag_up($params=null)
+{
+    $engine = Pluf::f('db_engine');
+    $db = Pluf::db();
+
+    if ($engine === 'PostgreSQL') {
+        $db->execute('ALTER TABLE '.$db->pfx.'idf_tags ALTER COLUMN project DROP NOT NULL');
+    } else if ($engine === 'MySQL') {
+        $db->execute('ALTER TABLE '.$db->pfx.'idf_tags MODIFY project MEDIUMINT NULL');
+        // this is only needed for non-transactional setups where MySQL set 0 as default value
+        $db->execute('UPDATE '.$db->pfx.'idf_tags SET project=NULL WHERE project=0');
+    }
+}
+
+function IDF_Migrations_25NullableProjectInTag_down($params=null)
+{
+    $db = Pluf::db();
+    if ($engine === 'PostgreSQL') {
+        $db->execute('ALTER TABLE '.$db->pfx.'idf_tags ALTER COLUMN project SET NOT NULL');
+    } else if ($engine === 'MySQL') {
+        $db->execute('ALTER TABLE '.$db->pfx.'idf_tags MODIFY project MEDIUMINT NOT NULL');
+    }
+}

src/IDF/Project.php

@@ -115,8 +115,7 @@ class IDF_Project extends Pluf_Model
                 array(
                     'join' => 'LEFT JOIN '.$activityTable.' ON current_activity='.$activityTable.'.id '
                              .'LEFT JOIN '.$tagTable.' ON idf_project_id='.$this->getSqlTable().'.id',
-                    'select' => $this->getSelect().', date, value',
+                    'select' => 'DISTINCT '.$this->getSelect().', date, value',
-                    'group' => $this->getSqlTable().'.id',
                     'props' => array(
                         'date' => 'current_activity_date',
                         'value' => 'current_activity_value'

src/IDF/Tag.php

@@ -48,7 +48,8 @@ class IDF_Tag extends Pluf_Model
                             array(
                                   'type' => 'Pluf_DB_Field_Foreignkey',
                                   'model' => 'IDF_Project',
-                                  'blank' => false,
+                                  'blank' => true,
+                                  'is_null' => true,
                                   'verbose' => __('project'),
                                   ),
                             'class' =>
@@ -76,13 +77,14 @@ class IDF_Tag extends Pluf_Model
                             );
 
         $table = $this->_con->pfx.'idf_project_idf_tag_assoc';
+        $cols = implode(', ', array_keys($this->_a['cols']));
         $this->_a['views'] = array(
             'join_projects' =>
                 array(
                 'join' => 'LEFT JOIN '.$table
                         .' ON idf_tag_id=id',
                 'select' => $this->getSelect().',COUNT(idf_project_id) as project_count',
-                'group' => 'idf_tag_id',
+                'group' => $cols,
                 'props' => array('project_count' => 'project_count'),
                 ),
         );
@@ -146,7 +148,7 @@ class IDF_Tag extends Pluf_Model
         $class = trim($class);
         $name = trim($name);
         $gtag = new IDF_Tag();
-        $sql = new Pluf_SQL('class=%s AND lcname=%s AND project=0',
+        $sql = new Pluf_SQL('class=%s AND lcname=%s AND project IS NULL',
                             array($class, mb_strtolower($name)));
         $tags = $gtag->getList(array('filter' => $sql->gen()));
         if ($tags->count() < 1) {
@@ -154,6 +156,7 @@ class IDF_Tag extends Pluf_Model
             $tag = new IDF_Tag();
             $tag->name = $name;
             $tag->class = $class;
+            $tag->project = null;
             $tag->create();
             return $tag;
         }

src/IDF/Template/MarkdownForge.php

@@ -83,7 +83,7 @@ class IDF_Template_MarkdownForge extends Pluf_Template_Tag
                     $name = $class;
                     $class = IDF_TAG_DEFAULT_CLASS;
                 }
-                $sql = new Pluf_SQL('class=%s AND lcname=%s AND project=0',
+                $sql = new Pluf_SQL('class=%s AND lcname=%s AND project IS NULL',
                                     array(strtolower($class), mb_strtolower($name)));
                 $tag = Pluf::factory('IDF_Tag')->getOne(array('filter' => $sql->gen()));
             }

src/IDF/Views.php

@@ -85,7 +85,7 @@ class IDF_Views
 
         $projects = self::getProjects($request->user, $tag, $order);
         $stats = self::getProjectsStatistics($projects);
-        $projectLabels = IDF_Forge::instance()->getProjectLabelsWithCounts();
+        $projectLabels = self::getProjectLabelsWithCounts($request->user);
 
         return Pluf_Shortcuts_RenderToResponse('idf/listProjects.html',
                                                array('page_title' => __('Projects'),
@@ -371,6 +371,62 @@ class IDF_Views
 
     }
 
+    /**
+     * Returns a list of ids of projects that are visible for the given user
+     *
+     * @param Pluf_User $user
+     */
+    private static function getUserVisibleProjectIds($user)
+    {
+        $db =& Pluf::db();
+        // the administrator can see all projects
+        if ($user->administrator) {
+            $ids = array();
+            $sql_results = $db->select(
+                'SELECT id FROM '.Pluf::f('db_table_prefix', '').'idf_projects'
+            );
+            foreach ($sql_results as $id) {
+                $ids[] = $id['id'];
+            }
+            return $ids;
+        }
+
+        // anonymous users can only see non-private projects
+        $false = Pluf_DB_BooleanToDb(false, $db);
+        $sql_results = $db->select(
+            'SELECT id FROM '.$db->pfx.'idf_projects '.
+            'WHERE '.$db->qn('private').'='.$false
+        );
+
+        $ids = array();
+        foreach ($sql_results as $id) {
+            $ids[] = $id['id'];
+        }
+
+        // registered users may additionally see private projects with which
+        // they're somehow affiliated
+        if (!$user->isAnonymous()) {
+            $perms = array(
+                Pluf_Permission::getFromString('IDF.project-member'),
+                Pluf_Permission::getFromString('IDF.project-owner'),
+                Pluf_Permission::getFromString('IDF.project-authorized-user')
+            );
+            $permSql = new Pluf_SQL(
+                "model_class='IDF_Project' AND owner_class='Pluf_User' ".
+                "AND owner_id=%s AND negative=".$false, $user->id
+            );
+            $rows = Pluf::factory('Pluf_RowPermission')->getList(array('filter' => $permSql->gen()));
+            if ($rows->count() > 0) {
+                foreach ($rows as $row) {
+                    if (in_array($row->model_id, $ids))
+                        continue;
+                    $ids[] = $row->model_id;
+                }
+            }
+        }
+        return $ids;
+    }
+
     /**
      * Returns a list of projects accessible for the user and optionally filtered by tag.
      *
@@ -381,37 +437,14 @@ class IDF_Views
     public static function getProjects($user, $tag = false, $order = 'name')
     {
         $db =& Pluf::db();
-        $false = Pluf_DB_BooleanToDb(false, $db);
+        $sql = new Pluf_SQL('1=1');
-        $sql = new Pluf_SQL(1);
         if ($tag !== false) {
             $sql->SAnd(new Pluf_SQL('idf_tag_id=%s', $tag->id));
         }
 
-        if ($user->isAnonymous())
+        $projectIds = self::getUserVisibleProjectIds($user);
-        {
+        if (count($projectIds) > 0) {
-            $authSql = new Pluf_SQL('private=%s', $false);
+            $sql->SAnd(new Pluf_SQL(sprintf($db->pfx.'idf_projects.id IN (%s)', implode(', ', $projectIds))));
-            $sql->SAnd($authSql);
-        } else
-        if (!$user->administrator) {
-            // grab the list of projects where the user is admin,
-            // member or authorized
-            $perms = array(
-                Pluf_Permission::getFromString('IDF.project-member'),
-                Pluf_Permission::getFromString('IDF.project-owner'),
-                Pluf_Permission::getFromString('IDF.project-authorized-user')
-            );
-            $permSql = new Pluf_SQL("model_class='IDF_Project' AND owner_class='Pluf_User' AND owner_id=%s AND negative=".$false, $user->id);
-            $rows = Pluf::factory('Pluf_RowPermission')->getList(array('filter' => $permSql->gen()));
-
-            $authSql = new Pluf_SQL('private=%s', $false);
-            if ($rows->count() > 0) {
-                $ids = array();
-                foreach ($rows as $row) {
-                    $ids[] = $row->model_id;
-                }
-                $authSql->SOr(new Pluf_SQL(sprintf($db->pfx.'idf_projects.id IN (%s)', implode(', ', $ids))));
-            }
-            $sql->SAnd($authSql);
         }
 
         $orderTypes = array(
@@ -425,6 +458,46 @@ class IDF_Views
         ));
     }
 
+    /**
+     * Returns a list of global tags each carrying the number of projects that have the
+     * particular tag set
+     *
+     * @param Pluf_User $user
+     * @return array
+     */
+    public static function getProjectLabelsWithCounts($user) {
+
+        $sql = new Pluf_SQL('project IS NULL');
+
+        $projectIds = self::getUserVisibleProjectIds($user);
+        if (count($projectIds) > 0) {
+            $sql->SAnd(new Pluf_SQL(sprintf('idf_project_id IN (%s)', implode(', ', $projectIds))));
+        }
+
+        $tagList = Pluf::factory('IDF_Tag')->getList(array(
+            'filter' => $sql->gen(),
+            'view' => 'join_projects',
+            'order' => 'class ASC, lcname ASC'
+        ));
+
+        $maxProjectCount = 0;
+        foreach ($tagList as $tag) {
+            $maxProjectCount = max($maxProjectCount, $tag->project_count);
+        }
+
+        $tags = array();
+        foreach ($tagList as $tag) {
+            // group by class
+            if (!array_key_exists($tag->class, $tags)) {
+                $tags[$tag->class] = array();
+            }
+            $tag->rel_project_count = $tag->project_count / (double) $maxProjectCount;
+            $tags[$tag->class][] = $tag;
+        }
+        return $tags;
+    }
+
+
     /**
      * Returns statistics on a list of projects.
      *
@@ -433,27 +506,30 @@ class IDF_Views
      */
     public static function getProjectsStatistics($projects)
     {
-        // Init the return var
+        $projectIds = array(0);
-        $forgestats = array('downloads' => 0,
+        foreach ($projects as $project) {
-                            'reviews' => 0,
+            $projectIds[] = $project->id;
-                            'issues' => 0,
-                            'docpages' => 0,
-                            'commits' => 0);
-
-        // Count for each projects
-        foreach ($projects as $p) {
-            $pstats = $p->getStats();
-            $forgestats['downloads'] += $pstats['downloads'];
-            $forgestats['reviews'] += $pstats['reviews'];
-            $forgestats['issues'] += $pstats['issues'];
-            $forgestats['docpages'] += $pstats['docpages'];
-            $forgestats['commits'] += $pstats['commits'];
         }
 
-        // Count members
+        $forgestats = array();
-        $sql = new Pluf_SQL('first_name != %s', array('---'));
+
-        $forgestats['members'] = Pluf::factory('Pluf_User')
+        // count overall project stats
-            ->getCount(array('filter' => $sql->gen()));
+        $forgestats['total'] = 0;
+        $what = array(
+            'downloads' => 'IDF_Upload',
+            'reviews'   => 'IDF_Review',
+            'issues'    => 'IDF_Issue',
+            'docpages'  => 'IDF_Wiki_Page',
+            'commits'   => 'IDF_Commit',
+        );
+
+        foreach ($what as $key => $model) {
+            $count = Pluf::factory($model)->getCount(array(
+                'filter' => sprintf('project IN (%s)', implode(', ', $projectIds))
+            ));
+            $forgestats[$key] = $count;
+            $forgestats['total'] += $count;
+        }
 
         return $forgestats;
     }

src/IDF/templates/idf/listProjects.html

@@ -48,7 +48,6 @@
 
 <strong>{trans 'Filtered project stats'}</strong>
 <dl class="statistics smaller">
-<dt>{trans 'Members:'}</dt><dd>{$stats.members}</dd>
 <dt>{trans 'Issues:'}</dt><dd>{$stats.issues}</dd>
 <dt>{trans 'Commits:'}</dt><dd>{$stats.commits}</dd>
 <dt>{trans 'Documentations:'}</dt><dd>{$stats.docpages}</dd>

src/IDF/version.php

@@ -1,5 +1,5 @@
 <?php
 return array(
-    'version'  => '1.3-dev',
+    'version'  => '1.3.2',
     'revision' => '$Format:%H$',
 );

test/data/IDF_DiffTest/test-02-svn-new-files-with-properties.expected

@@ -80,7 +80,6 @@
           0 => '',
           1 => 11,
           2 => '
-
 ',
         ),
       ),
@@ -102,4 +101,4 @@
       ),
     ),
   ),
-);
+);

www/media/idf/js/wiki-toc.js

@@ -1,9 +1,12 @@
 $(document).ready(function() {
     $(":header", "#wiki-content").map(function(index) {
-        this.id = "wikititle_" + index;
+        var $header = $(this);
-        $("<a href='#" + this.id + "'>" + jQuery.fn.text([this]) + "</a>")
+        var $toc = $('#wiki-toc-content');
-            .addClass("wiki-" + this.tagName.toLowerCase())
+        $header.attr('id', 'wikititle_' + index);
-            .appendTo('#wiki-toc-content');
+        $('<a />').attr('href', '#' + $header.attr('id'))
+            .text($header.text())
+            .addClass("wiki-" + $header[0].tagName.toLowerCase())
+            .appendTo($toc);
     });
     if ($('#wiki-toc-content *').size() < 2)
         $('#wiki-toc').hide();